GEO Accession viewer

GSE29991	Messenger RNA is a functional component of a chromatin insulator complex
GSE30755	Genome-wide reductions in active chromatin, paused RNA Polymerase II and nucleosome turnover during heat shock
GSE31407	Drosophila DrosDel deficiency and diploid control flies
GSE31550	DNA-Seq of DrosDel deficiency lines and w1118 lines
GSE32120	The little elongation complex (LEC) regulates small nuclear RNA transcription
GSE32570	Protein/DNA in vitro Binding seq (PB-seq) for Drosophila HSF and genomic Drosophila DNA
GSE33905	Identification of polyA sites in Drosophila melanogaster
GSE34453	Three-dimensional folding and functional organization principles of the Drosophila genome
GSE34506	piRNA-mediated transgenerational inheritance of an acquired trait
GSE35637	UAP56 couples piRNA clusters to the perinuclear transposon silencing machinery [RNA-Seq and RIP-Seq]
GSE35638	UAP56 couples piRNA clusters to the perinuclear transposon silencing machinery
GSE35981	High-throughput sequencing of small RNAs (25-70 nt) from Drosophila wild-type and Dnmt2 mutants
GSE36108	Deep sequencing the circadian and light-dependent transcriptome of Drosophila brain
GSE36180	Effects of pharmacologic FSH inhibition on gene expression
GSE36212	Promoter activity profiling throughout the Drosophila life cycle reveals role of transposons in regulatory innovation
GSE36213	Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE
GSE36377	Activating transcription factor 3 regulates immune and metabolic homeostasis
GSE36393	Distribution of Drosophila insulator proteins Mod(mdg4) and L(3)mbt in Kc cells
GSE36450	The BET protein FSH functionally interacts with ASH1 to orchestrate global gene activity in Drosophila
GSE37027	Cell type-specific gene expression profiling of Drosophila neurons [RNA-Seq]
GSE37032	Cell type-specific chromatin profiling of Drosophila neurons [ChIP-Seq]
GSE37033	Cell type-specific gene expression and chromatin profiling of Drosophila neurons
GSE37232	Nascent-seq indicates widespread cotranscriptional RNA editing in Drosophila
GSE37444	Distribution of histone modificiation H3K27me3 in Drosophila Kc cells, comparison with dCTCF knockdown
GSE37756	Identification of protein-RNA interactions in Drosophila using RIP-Seq
GSE37811	mRNA-Seq of head tissue from Doa and fne mutants, Drosophila melanogaster.
GSE37864	ChIP-Seq profiles of MSL1, MSL2, MSl3, MOF, MLE, H4K16ac and RNA Polymerase II phosphorlyated on Serine 5 in Drosophila S2 cells
GSE37865	Differential Chromatin Binding of the Drosophila Dosage Compensation Complex
GSE38166	Polycomb Group proteins are retained at specific sites on chromatin in mitosis
GSE38402	Integrative analysis of the zinc finger transcription factor Lame duck in the Drosophila myogenic gene regulatory network
GSE38435	New partners in regulation of gene expression: the Enhancer of Trithorax and Polycomb Corto interacts with methylated Ribosomal Protein L12 via its chromodomain.
GSE38594	Genome-wide binding of Yki and GAF in embryos and wing imaginal discs [ChIP-Seq]
GSE38727	A common set of DNA regulatory elements shapes Drosophila appendages
GSE38728	Major concepts of piRNA biogenesis revealed by the analysis of Shutdown, a co-chaperone with essential roles in the biogenesis of all Drosophila piRNA populations
GSE38764	Transcriptome analysis of Drosophila neural stem cells reveals a transcriptional network for self-renewal.
GSE38998	RNA sequencing in fly heads to examine the effect of spermidine feeding on transcription in the ageing fly brain.
GSE39083	RNA expression in Drosophila melanogaster mutants lacking HP1a
GSE39271	Synergistic interactions between CLAMP and MSL complex facilitate Drosophila dosage compensation
GSE39664	Distribution of Drosophila insulator proteins DREF in Drosophila Kc167 cells
GSE39781	RNA-seq in wild-type and glass mutant eye-antennal discs in Drosophila melanogaster
GSE39784	Tag-seq in eye-antennal and wing imaginal discs of D.melanogaster, D.yakuba, and D.virilis; RNA-seq in wild-type and glass mutant D.melanogaster eye-antennal imaginal discs.
GSE39911	Transcriptome-wide Regulation of Splicing and mRNA Localization by Muscleblind Proteins
GSE39996	Dnmt2-dependent methylomes lack biologically relevant DNA methylation patterns [Drosophila melanogaster]
GSE40150	Piwi negatively regulates Polycomb Group proteins in maintaining germline stem cells and oogenesis
GSE40432	High-throughput sequencing of HMW RNAs (4-10 kb) from Drosophila Dnmt2 mutants during heat shock recovery
GSE40646	The Genomic Binding Profile of GAGA Element Associated Factor (GAF) in Drosophila S2 cells
GSE40739	Genome-wide quantitative enhancer activity maps identified by STARR-seq
GSE40748	A user-friendly chromatographic method to purify small regulatory RNAs
GSE40797	Tissue-specific regulation of chromatin insulator function
GSE40907	Population and sex differences in Drosophila melanogaster brain gene expression
GSE41047	Genome-wide analysis of regulation of gene expression and H3K9me2 distribution by JIL-1 kinase mediated histone H3S10 phosphorylation in drosophila
GSE41346	Paired End CNV Kc 167
GSE41347	Paired End CNV S2 DRSC Cells
GSE41348	Paired End CNV W1 Cl.8+ Cells
GSE41349	KC WT Repliseq
GSE41350	S2 WT Repliseq
GSE41351	BG3 WT Repliseq
GSE41354	Distribution of insulator proteins CP190, dCTCF, Su(Hw) and Mod(mdg4)2.2 in Drosophila S2 cells in the presence or absence of dPARP inhibitor 3AB
GSE41440	Enhancer-associated H3K4 mono-methylation by Drosophila Trithorax-related, the Drosophila homolog of Mll3/Mll4
GSE41487	Analysis of the humoral immune response against aberrant self by RNA sequencing of the fat body in Drosophila melanogaster
GSE41503	Highly parallel assays of tissue-specific enhancers in whole Drosophila embryos
GSE41634	RNAi triggered by specialized machinery silences developmental genes and retrotransposons (RNA-Seq)
GSE41643	RNAi triggered by specialized machinery silences developmental genes and retrotransposons
GSE41729	Transcriptional silencing of transposable elements by Piwi and its impact on chromatin and gene expression
GSE41780	De novo piRNA cluster formation in the Drosophila germline triggered by transgenes containing a transcribed transposon fragment
GSE41950	Genome-wide localization of exosome components to active promoters and chromatin insulators in Drosophila
GSE41953	Evolution and dynamics of small RNA response to a retroelement invasion in Drosphila
GSE42025	Chromatin proteins linked to dosage compensation in Drosophila captured by ChIP-mass spectrometry
GSE42086	Two isoforms of Fs(1)h ChIP-seq
GSE42117	Precise Maps of RNA Polymerase Reveal How Promoters Direct Initiation and Pausing
GSE42397	Genome-wide control of RNA polymerase II activity by cohesin (sequencing)
GSE42399	Genome-wide control of RNA polymerase II activity by cohesin
GSE43130	Genome-wide binding of Yki and GAF in embryos and wing imaginal discs
GSE43180	Effects of FSH knockdown on gene expression
GSE43360	Multiple roles for Piwi in silencing Drosophila transposons
GSE43506	Sequencing mRNA from cryo-sliced Drosophila embryos to determine genome-wide spatial patterns of gene expression
GSE43734	Expression data from 0.15M and 0.7M-fed wild-type and ChREBP mutant, third instar Drosophila larval fat bodies (FBs)
GSE43829	Piwi induces piRNA-guided transcriptional silencing and establishment of a repressive chromatin state
GSE44612	Comparative Validation of the D. melanogaster Encyclopedia of DNA Elements Transcript Models
GSE45112	Transcriptome and transposable element dynamics during PIWI regulation in Drosophila ovarian cell cultures
GSE45293	Temperature Sensitive Remodeling of Fruit Fly Physical Chromosomal Domains upon Heat Shock
GSE45672	High-resolution mapping of transcription factor binding sites on native chromatin
GSE45873	Holo-TFIID controls the magnitude of a transcription burst and fine-tuning of transcription.
GSE45894	The genetic framework of the Drosophila piRNA pathway
GSE46009	A genome-wide RNAi screen draws a genetic framework for transposon control and primary piRNA biogenesis in Drosophila
GSE46099	A transcriptome-wide RNAi screen in the Drosophila ovary reveals factors of the germline piRNA pathway [smallRNA-Seq]
GSE46100	A transcriptome-wide RNAi screen in the Drosophila ovary reveals factors of the germline piRNA pathway [RNA-Seq]
GSE46101	A transcriptome-wide RNAi screen in the Drosophila ovary reveals factors of the germline piRNA pathway
GSE46105	Euchromatic transposon insertions trigger production of novel pi- and endo-siRNAs at the target sites in the Drosophila germline
GSE46305	Genome-wide binding of Yki in S2 cells
GSE47006	Expression profile and RNA Polymerase II occupancy of transposable elements among knock down of the piRNA pathway components in OSCs
GSE47207	An integrated 5'- and 3'-end RNA sequencing platform for high-throughput transcriptome quantitation and annotation
GSE47559	Ibf1 and Ibf2 are DNA-binding proteins required for insulator function in Drosophila
GSE47691	Hormone-responsive enhancer-activity maps reveal predictive motifs, indirect repression, and targeting of closed chromatin
GSE47780	Drosophila midgut regional gene expression
GSE47795	RNA Polymerase-II-generated DNA supercoils destabilize nucleosomes
GSE47829	High-resolution mapping defines the cooperative architecture of Polycomb Response Elements
GSE47938	Multiple roles for LEC in initiation and elongation phases of snRNA gene transcription
GSE47999	Drosophila melanogaster Show a Threshold Effect in Response to Radiation
GSE48251	Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution
GSE48317	Drosophila Gtsf1 is an essential component of the Piwi mediated transcriptional silencing complex
GSE48431	Multiplexed Illumina sequencing libraries from picogram quantities of DNA
GSE49106	Nucleosomes are context-specific, H2A.Z modulated barriers to RNA polymerase
GSE49197	Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster
GSE49480	Identifying targets of DSX with ChIP-seq, DamID-seq and DamID-chip and transcriptional response to DSX isoform switch
GSE49587	Developmental arrest of Drosophila survival motor neuron (Smn) mutants accounts for differences in expression of minor intron-containing genes
GSE49899	Diverse patterns of genome-wide DNA targeting by transcriptional regulators in Drosophila melanogaster
GSE50055	Effect of Nbr on the length of piRNAs and endo-siRNAs in Drosophila
GSE50377	Mining gene expression data for low doses of radiation and pollutants (dioxin, toluene, formaldehyde)
GSE50711	Analysis of chimeric reads from RNA-seq data
GSE50769	Mapping the inter- and intra-chromosomal interactions of specific insulator binding sites with circular chromosome conformation capture (4C) assay (Gondor et al., 2008 Nature Protocol)
GSE50984	RNA helicase Spn-E is required to maintain Aub and AGO3 protein levels for piRNA silencing in the germline of Drosophila
GSE51462	The RNA-binding protein Rumpelstiltskin antagonizes gypsy chromatin insulator function in a tissue-specific manner
GSE51585	Intertwined pathways for Argonaute-mediated microRNA biogenesis in Drosophila
GSE52240	Ibf contributes to CP190 recruitment to chromatin [ChIP-seq]
GSE52472	Non-canonical TSSs of TEs alter gene structure and expression in Drosophila melanogaster
GSE52799	Polysome profiling and ribosome footprinting of Drosophila mature oocyte and activated egg
GSE52884	Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins [RNA-Seq]
GSE52886	Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins [CP190 ChIP-Seq]
GSE52887	Next Generation Sequencing analysis of Functional Interactions among Insulator Proteins
GSE52960	small RNA deep-sequencing with oxidation/β-elimination with age in Drosophila
GSE52961	Ago1 vs Ago2-IP small RNA deep-sequencing with age in Drosophila
GSE52963	Impact Of Age-Associated Increase In 2'-O-Methylation Of miRNAs On Aging And Neurodegeneration In Drosophila
GSE53015	Small RNA sequencing of control and Su(var)3-7 mutant Drosophila ovary
GSE53020	Domain ChIRP reveals the modularity of long noncoding RNA architecture, function, and target genes
GSE53238	H3K27me3 ChIP-seq experiment in fruitfly testis somatic gonadal cells
GSE53265	Ecdysone and Mediator trigger a metabolic switch uncoupling cell cycle from cell growth to end proliferation in Drosophila neural stem cells
GSE53719	Tau promotes neurodegeneration through global chromatin relaxation
GSE53788	mRNA profiling of JHDM2 knockdown Drosophila midguts post-infection with Ecc15
GSE54438	Genome-wide analysis of H3K9me2 and JIL-1 kinase mediated histone H3S10 phosphorylation in drosophila [ChIP-seq: 13 samples]
GSE54440	Genome wide analysis of transcriptome wild type and JIL-1 mutant [RNA-seq: 4 samples]
GSE54529	ChIP-seq mapping of Drosophila TFIIIC (dTFIIIC220; CG7099) and SMC containing complexes in Kc167 cells
GSE54724	Quality assessment and control of tissue specific RNA-seq libraries of Drosophila transgenic RNAi models
GSE54755	Transforming growth factor β/activin signaling functions as a sugar-sensing feedback loop to regulate digestive enzyme expression.
GSE54875	HITS-CLIP analysis of Yb binding sites in Drosophila ovary cell line
GSE55256	Impacts of the Ubiquitous Factor Zelda on Bicoid-dependent DNA-binding and Transcription in Drosophila
GSE55257	H3K27 modifications define segmental regulatory domains in the Drosophila bithorax complex.
GSE55303	Identification of new regulators of the three dimensional Polycomb organization by a microscopy-based genome-wide RNAi screen
GSE55306	ChIP-nexus: a novel ChIP-exo protocol for improved detection of in vivo transcription factor binding footprints
GSE55824	The Rhino-Deadlock-Cutoff complex licenses non-canonical transcription of dual-strand piRNA clusters in Drosophila
GSE55839	Differential gene expression following exposure to rivals in male Drosophila melanogaster.
GSE55848	Identification of transcripts whose abundance changes in response to acute switches in DSX isoform
GSE55872	Detection of circRNA in Drosophila Fly heads and S2 cells using RNA-seq with or without RNaseR tretment
GSE55894	Su(Hw) and Shep RIP-seq in Kc and BG3 cell lines
GSE55932	ChIP-Seq of gamma-H2Av bound to third instar salivary gland DNA in WT and SuUR mutant Drosophila; ChIP-Seq of SUUR and Cdc45 bound to egg chamber DNA from early and late stage egg chambers
GSE56013	Transcriptome of wild-type and G9a mutant upon viral challenge
GSE56056	SuUR role in regulation of DNA replication
GSE56101	Heterochromatin-associated interactions of Drosophila HP1 with dADD1, HIPP1, and repetitive RNAs
GSE56347	Impact of nuclear Piwi elimination on chromatin state in Drosophila melanogaster ovaries
GSE57165	Illumina Sequencing data of Insulator Proteins and the co-factor dMes-4
GSE57167	Illumina Sequencing data of the influence on gene expression of insulator protein co-factor dMes-4
GSE57168	Insulators recruit histone methyltransferase dMes4 to regulate chromatin of flanking genes
GSE57202	T-TRAP Profiling Reveals Dynamic Changes in the Transcriptome during Circuit Assembly
GSE57687	Profling of the Drosophila melanogaster neuronal microRNA transcriptome by small RNA deep sequencing
GSE57710	The exon junction complex controls transposable element activity by ensuring the faithful splicing of the piwi transcript
GSE57876	Enhancer-core promoter specificity separates developmental and housekeeping regulation
GSE57941	mRNA profiling of Drosophila midguts treated by uracil
GSE58578	Population- and sex-biased gene expression in the excretion organs of Drosophila melanogaster
GSE58821	High-Affinity Sites Form an Interaction Network to Facilitate Spreading of the MSL Complex across the X Chromosome in Drosophila
GSE58830	The exon junction complex is required for definition and excision of neighboring introns in Drosophila
GSE58935	Establishment of regions of genomic activity during the Drosophila maternal-to-zygotic transition
GSE58937	The Drosophila Tis11 protein and its effects on mRNA expression in flies
GSE59059	Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference. [RNA-seq]
GSE59078	Discovery of Transcription Factors and Regulatory Regions Driving In Vivo Tumor Development by ATAC-seq and FAIRE-seq Open Chromatin Profiling
GSE59192	A strand-specific switch in noncoding transcription switches the function of a Polycomb/Trithorax response element
GSE59411	Genetic, Molecular and Physiological Basis of Variation in Gut Immunocompetence
GSE59604	Trans-generationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing [ChIP-seq]
GSE59605	Trans-generationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing [run-on]
GSE59606	Trans-generationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing [small RNA-IP]
GSE59607	Trans-generationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing [Rhino RNA-seq]
GSE59608	Trans-generationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing [cuff smallRNA]
GSE59609	Trans-generationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing [cuff RNA-seq]
GSE59610	Trans-generationally inherited piRNAs trigger piRNA biogenesis by changing the chromatin of piRNA clusters and inducing precursor processing
GSE59611	RNA-binding profiles of Drosophila CPEB proteins Orb and Orb2
GSE59706	Identification of lineage-specific cis-regulatory modules associated with variation in transcription factor binding and chromatin activity using Ornstein-Uhlenbeck models
GSE59707	Evolutionary changes in cis regulation are associated with altered chromatin activity and gene expression levels in the Drosophila eye development (RNA-Seq)
GSE59726	Su(H) early embryonic ChIP-seq
GSE59891	Histone H3 lysine-to-methionine mutants as a paradigm to study chromatin signaling
GSE59924	A Novel Role of Polycomb in Positive Transcription Regulation by Modulating H4K20me1
GSE60104	Global ChIP-seq Normalization Reveals Epigenome Modulations
GSE60215	A streamline experimental and computational approach for inexpensive, accurate, efficient and high-throughput annotation of 5’ and 3’ ends
GSE60314	mRNA sequence data of individual Drosophila melanogaster male and female flies from 16 Drosophila Genetic Reference Panel lines reared in replicated environments
GSE60384	Extensive translation of small Open Reading Frames revealed by Poly-Ribo-Seq
GSE60428	Cooperativity, specificity and evolutionary stability of Polycomb targeting in Drosophila
GSE60471	Drosophila melanogaster high resolution developmental transcriptomic time-course
GSE60571	RNA-Seq of female, male, and sex-transformed Drosophila melanogaster heads from flies heterozygous for deletions on chromosome X and 3L
GSE60686	Genome wide analysis of binding of Polyhomeotic and polymerization defective Polyhomeotic in Drosophila S2 cells
GSE60822	Drosophila Larval Brain RNA sequencing of ablation versus activation of E347 neurons
GSE60972	MicroRNA-dependent transposable element transcriptional silencing in Drosophila somatic ovarian cells [RNA-Seq]
GSE60973	MicroRNA-dependent transposable element transcriptional silencing in Drosophila somatic ovarian cells [RIP-Seq]
GSE60974	MicroRNA-dependent transposable element transcriptional silencing in Drosophila somatic ovarian cells
GSE61280	Genome-wide activities of Polycomb complexes
GSE61307	Genome-wide analysis of whole transcriptome in E(z) temperature sensitive cells [RNA-Seq]
GSE61308	Genome-wide analysis of epigenetic marks in E(z) temperature sensitive cells [ChIP-seq]
GSE61340	ChIP-seq of MSL1 in male and female fly samples
GSE61361	Transcriptome profiling of Drosophila intestinal cells
GSE61466	RNA-Sequencing analysis of the Drosophila transcriptomic response to infection by entomopathogenic nematodes and their mutualistic bacteria
GSE61471	Cooperativity, specificity and evolutionary stability of Polycomb targeting in Drosophila
GSE61509	Expression profiling pooled Drosophila melanogaster heterozygous for deletions on Chromosome 2L
GSE61689	Identifying the targets of the pair-rule transcription factors Even-skipped and Runt in the late Drosophila blastoderm
GSE61846	Small RNAs from third instar Drosophila melanogaster males
GSE61931	Adenylation of maternally inherited microRNAs by Wispy
GSE62556	The evolution of genic piRNA cluster loci expression patterns
GSE62557	Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference [ChIP-Seq]
GSE62558	Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference
GSE62580	Age-associated loss of lamin-B leads to systemic inflammation and gut hyperplasia
GSE62904	Widespread rearrangement of 3D chromatin organization underlies Polycomb-mediated stress-induced silencing [ChIP]
GSE62997	Drosophila Imp iCLIP identifies an RNA assemblage co-ordinating F-actin formation
GSE63261	SR proteins control a complex network of RNA-processing events
GSE63262	iCLIP seq reveals distribution of genome-wide SR protein-RNA binding
GSE63263	RNA-seq analysis of the eight Drosophila SR protein family members
GSE63323	ELAV ChIP-seq in Drosophila melanogaster embryos
GSE63333	Genome-wide binding patterns of group B Sox proteins in four Drosophila species
GSE63515	Widespread rearrangement of 3D chromatin organization underlies Polycomb-mediated stress-induced silencing [Hi-C]
GSE63518	Widespread rearrangement of 3D chromatin organization underlies Polycomb-mediated stress-induced silencing
GSE63707	The RNA binding protein Arrest (Aret) regulates myofibril maturation in Drosophila flight muscle
GSE63770	Embryonic small RNA and RNA profiles of Tribolium castaneum and Drosophila oocytes
GSE63795	The relative importance of DNA methylation and Dnmt2-mediated epigenetic regulation on Wolbachia densities and cytoplasmic incompatibility
GSE64219	Genome-wide analysis of histone marks in E(z) temperature sensitive cells [ChIP-seq]
GSE64284	Genome-wide Ultrabithorax binding analysis reveals highly targeted genomic loci at developmental regulators and a potential connection to Polycomb-mediated regulation
GSE64405	The temporal patterning system governs the malignant susceptibility of neural progeny during Drosophila development
GSE64802	piRNA-guided slicing specifies transcripts for Zucchini dependent, phased piRNA biogenesis
GSE65150	Assessment of Su(H) binding sites in the Drosophila S2-DRSC cell line
GSE65250	Tissue overgrowth induced by coexpression of the progenitor genes hth/MEIS1 and tsh/TSHZ results from an imbalance in the estrogen response pathway in Drosophila [FAIRE-Seq]
GSE65251	Tissue overgrowth induced by coexpression of the progenitor genes hth/MEIS1 and tsh/TSHZ results from an imbalance in the estrogen response pathway in Drosophila [RNA-Seq]
GSE65252	Tissue overgrowth induced by coexpression of the progenitor genes hth/MEIS1 and tsh/TSHZ results from an imbalance in the estrogen response pathway in Drosophila
GSE65261	Ets-domain transcription factor Ets21c and nuclear receptor Ftz-F1 are novel effectors of JNK promoting tumor malignancy
GSE65441	Zelda overcomes the high intrinsic nucleosome barrier at enhancers during Drosophila zygotic genome activation
GSE65567	Drosophila ovarian stage 8 and 10 follicle gene expression
GSE65692	High-Resolution Profiling of Drosophila Replication Start Sites Reveals a DNA Shape and Chromatin Signature of Metazoan Origins
GSE65837	Zelda determines chromatin accessibility during the Drosophila maternal-to-zygotic transition
GSE66212	ChIPseq analysis of MYST5 (cg1894) in Drosophila S2 cells
GSE66213	Uridylation of RNA-hairpins by Tailor confines the emergence of novel miRNAs in Drosophila
GSE66689	gammaH2Av ChIP-seq in Drosophila stage 10B and 13 follicle cells
GSE66691	Replication fork progression during re-replication requires the DNA damage checkpoint and double-strand break repair
GSE67082	Quantification of RNA editing in the Drosophila Genetic Reference Panel
GSE67177	Survival rate and transcriptional response upon infection with the generalist parasite Beauveria bassiana in a world-wide sample of Drosophila melanogaster
GSE67346	The ChIP-Sequence data of STAT92E in Drosophila adult intestines
GSE67503	RNA-Seq profiles of Drosophila melanogaster S3 cells treated with novel lipid storage inhibitors
GSE67505	Genetic basis of transcriptome diversity in Drosophila melanogaster
GSE67855	Active N6-Methyladenine demethylation by DMAD regulates gene expression by modulating the binding dynamics of Polycomb protein in neurons
GSE67984	Small RNAs from Drosophila melanogaster WT and Tailor mutant S2 cells and ovaries
GSE68062	Sex bias and maternal contribution to gene expression divergence in Drosophila blastoderm embryos
GSE68235	Complementary Expression of Immunoglobulin Superfamily Ligands and Receptors in Synaptic Pairs in the Drosophila Visual System
GSE68654	CTCF and Smad signaling proteins and response to DPP
GSE68983	Genome-wide analysis of enhancers in Drosophila DV patterning
GSE68997	Piwi is a key regulator of both somatic and germline stem cells in the Drosophila testis
GSE69013	Active chromatin and transcription play a key role in chromosome partitioning into topologiсally associating domains
GSE69102	RNA elements in precursors instruct directional and processive primary piRNA biogenesis
GSE69177	Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in D. melanogaster [MNase]
GSE69208	roX ChIRP-seq in four Drosophila species
GSE69212	RNA-seq of Drosophila 0-2 hr embryos
GSE69293	Krimper enforces an antisense bias on piRNA pools by binding AGO3 in the Drosophila germline
GSE69335	Genome-wide profiling of nucleosome sensitivity and chromatin accessibility to MNase in D. melanogaster [RNA-seq]
GSE69336	Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in D. melanogaster
GSE69417	Developmental regulation of piRNAs during spermatogenesis in Drosophila melanogaster
GSE69625	Somatic Primary piRNA Biogenesis Driven by Cis-Acting RNA Elements and Trans- Acting Yb
GSE69796	Roles of Cofactors and Chromatin Accessibility in Hox Protein Target Specificity
GSE69934	Small RNA-seq during the ecdysone and heat-shock response in Drosophila Kc167 cells
GSE70185	The mid-developmental transition and the evolution of animal body plans
GSE70589	Genome-wide maps of KDM5 binding in drosophila adults
GSE70590	RNA-seq analyses of kdm5 mutant flies and wt flies under normal condition and oxidative stress
GSE70591	KDM5 occupancy and expression profiling of kdm5 mutant flies and wt flies under normal condition and oxidative stress
GSE70777	Aubergine iCLIP reveals direct regulation of mRNAs involved in germ cell development by piRNAs in the early embryo
GSE70778	Aubergine iCLIP and expression
GSE70978	Sugar responsive regulatory network that controls organismal carbohydrate, amino acid and lipid homeostasis [set 1]
GSE70980	Sugar responsive regulatory network that controls organismal carbohydrate, amino acid and lipid homeostasis
GSE71093	EB-transcriptome in Drosophila midgut
GSE71137	Genome-wide measurement of spatial expression in mutants of Drosophila Melanogaster
GSE71206	Deciphering the direct transcriptional targets of the Drosophila Activating transcription factor 3 (Atf3) via ChIp-seq: Atf3 bridges the gap between cell polarity and the nucleus
GSE71350	An ectopic network of transcription factors regulated by Hippo signaling drives growth and invasion of a malignant tumor model [larval imaginal discs]
GSE71354	An ectopic network of transcription factors regulated by Hippo signaling drives growth and invasion of a malignant tumor model
GSE71368	Panoramix enforces piRNA-dependent co-transcriptional silencing (ChIP-Seq)
GSE71369	Panoramix enforces piRNA-dependent co-transcriptional silencing (GRO-Seq)
GSE71371	Panoramix enforces piRNA-dependent co-transcriptional silencing (RNA-Seq)
GSE71372	Panoramix enforces piRNA-dependent co-transcriptional silencing (small RNA-Seq)
GSE71374	Panoramix enforces piRNA-dependent co-transcriptional silencing
GSE71430	In vivo transcriptional activation using CRISPR-Cas9 in Drosophila
GSE71775	piRNA-guided slicing of transposon transcripts enforces their transcriptional silencing via specifying the nuclear piRNA repertoire
GSE71842	Genes expression in case of PEV caused by chromosomal rearrangement
GSE71971	Clustering of Drosophila housekeeping promoters facilitates their expression
GSE72171	Mapping binding sites of SIN3 isoforms across the Drosophila genome.
GSE72173	Genome-wide studies reveal novel biological pathways regulated by SIN3 isoforms
GSE72511	Polytene underreplication
GSE72512	Stable Chromosome Condensation Revealed by Chromosome Conformation Capture
GSE72830	Expression profiling of S2 cells overexpressing wildtype or polymerization-defective Ph
GSE72947	Sir2 mutants versus Controls at 2 weeks of age
GSE73179	Sucralose Promote Food Intake Through NPY and A Neuronal Fasting Response
GSE73353	Discovery of progenitor signatures by time series synexpression analysis during Drosophila cell immortalization [RNA-Seq]
GSE73354	Discovery of progenitor signatures by time series synexpression analysis during Drosophila cell immortalization
GSE73523	Drosophila HNF4 promotes glucose-stimulated insulin secretion and increased mitochondrial function in adults [RNA-seq]
GSE73668	Methylation of histone H4 lysine 20 by PR-Set7 ensures the integrity of late replicating sequence domains in Drosophila
GSE73675	Drosophila HNF4 promotes glucose-stimulated insulin secretion and increased mitochondrial function in adults [ChIP-seq]
GSE73676	Drosophila HNF4 promotes glucose-stimulated insulin secretion and increased mitochondrial function in adults
GSE73920	Expression profiling individual DrosDel flies heterozygous for deletions of chromosome 2L in a hybrid background
GSE73946	RNA Seq analysis of unchecked miR-998 expression in Drosophila melanogaster 3rd instar larval eye discs
GSE74080	Massive redeployment of PRC1 proteins suppresses tumor formation during Drosophila development
GSE74097	Silencio/CG9754 connects the Piwi-piRNA complex to the cellular heterochromatin machinery
GSE74105	Gene expression profiling of D. melanogaster strains with varied resistance and tolerance to L. monocytogenes infection
GSE74168	RNA-seq analysis of gliotactin (Gli)-knockdown Drosophila melanogaster posterior midguts enterocytes (EC)
GSE74171	RNA-seq analysis of young vs. old Drosophila melanogaster posterior midguts
GSE74172	RNA-seq analysis of Drosophila melanogaster posterior midguts
GSE74188	Genome-wide maps of Cic binding sites in intestinal stem cells (ISCs) & Entroblasts (EBs) and transcriptome profiling of Cic depleted progenitor cells (ISCs & Ebs).
GSE74772	Male_Female_Drosophila_Midgut
GSE74774	Tra_Targets_Drosophila_Midgut_StemCells
GSE74775	The sexual identity of adult intestinal stem cells controls organ size and plasticity.
GSE74907	Examination of SUUR and Pc chromatin proteins in slivary glands in presence or absence of SuUR mutation using DamID technique
GSE74909	Repressive Histone Marks Renewal Impedes Replication Fork Progression and Contributes To Late Replication in Drosophila
GSE75060	Knockdown of Polyhomeotic in Drosophila Kc cells
GSE75831	Inducible DamID systems for genomic mapping of chromatin proteins in Drosophila [DamID-seq]
GSE75833	Inducible DamID systems for genomic mapping of chromatin proteins in Drosophila [RNA-seq]
GSE75835	Inducible DamID systems for genomic mapping of chromatin proteins in Drosophila
GSE76173	Comparative transcriptomic analysis of human and Drosophila extracellular vesicles reveals extensive conservation
GSE76252	A robust (re-)annotation approach to generate unbiased mapping references for RNA-seq-based analyses of differential expression across closely related species
GSE76304	Transcriptome analysis of Drosophila melanogaster third instar larval ring glands points to novel functions and uncovers a cytochrome p450 required for development
GSE76396	Translatome profiling of Drosophila intestinal enterocytes upon Dietary Restriction
GSE76844	Interplay between RNA interference and heat shock response systems in Drosophila melanogaster
GSE76997	Genome-wide distribution of proteins Pita, ZIPIC, Zw5 in Drosophila embryos
GSE77037	MicroRNAs circulate in the hemolymph of Drosophila and accumulate relative to tissue microRNAs in an age-dependent manner [mRNA]
GSE77038	MicroRNAs circulate in the hemolymph of Drosophila and accumulate relative to tissue microRNAs in an age-dependent manner [miRNA]
GSE77040	MicroRNAs circulate in the hemolymph of Drosophila and accumulate relative to tissue microRNAs in an age-dependent manner
GSE77198	mRNA-seq of nuclear RNA extracted from T4 and T5 neurons of D. melanogaster
GSE77294	RNA-seq of Drosophila unfertilized eggs
GSE77404	Canalization of gene expression is a major signature of regulatory cold adaptation in temperate "Drosophila melanogaster"
GSE77429	Organ-specific gene expression in single differentiating Drosophila embryos
GSE77451	RNA-seq analysis of Drosophila clock and non-clock neurons reveals neuron-specific cycling and novel candidate neuropeptides
GSE77492	Gene expression following: RNAi knockdown of grappa, lilliputian, or Suppressor of Triplolethal; induction of Cyclin-dependent kinase 9 dominant negative constructs, or ectopic expression of stand still in Drosophila melanogaster.
GSE77562	Ecdysone signaling induces two phases of cell cycle exit in Drosophila cells
GSE77607	Transcription factors GAF and HSF act at distinct regulatory steps to modulate stress-induced gene activation
GSE77706	High throughput sequencing identifies misregulated genes in the Drosophila Polypyrimidine Tract-binding protein (hephaestus) mutant defective in spermatogenesis
GSE77792	Gene expression profiling of Drosophila melanogaster 30 minutes after alcohol exposure
GSE78065	TRIBE : Hijacking an RNA-editing enzyme to identify cell-specific targets of RNA-binding proteins
GSE78135	Telomeric retrotransposon HeT-A contains a bidirectional promoter that initiates divergent transcription of piRNA precursors in Drosophila germline
GSE78886	Genome-wide quantitative core promoter activity maps reveal a wide range of sequence-intrinsic transcription initiation strengths
GSE79294	Identification of transcripts whose abundance changes in response to acute switches in DSX isoform in the ovary and testis
GSE79325	Splicing-independent loading of TREX on nascent RNA is required for efficient transcription of dual-strand piRNA clusters in Drosophila
GSE79550	mRNA sequence data from anterior ovarioles of w1118 virgin females of Drosophila melanogaster
GSE80323	Transcriptomic response of Drosophila melanogaster pupae developed in hypergravity
GSE80456	Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos [RNA-seq]
GSE80457	Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos [ChIP-seq]
GSE80458	Chromatin remodeling during in vivo neural stem cells differentiating to neurons in early Drosophila embryos
GSE80700	Different Enhancer Classes in Drosophila Bind Different Architectural Proteins and Mediate Unique Chromatin Interactions and 3D Architecture [ChIP-seq]
GSE80701	Distinct Enhancer Classes in Drosophila Bind Different Architectural Proteins and Mediate Unique Chromatin Interactions and 3D Architecture [Hi-C]
GSE80702	Different Enhancer Classes in Drosophila Bind Different Architectural Proteins and Mediate Unique Chromatin Interactions and 3D Architecture
GSE80790	Evolved Repression Overcomes Enhancer Robustness
GSE81100	Aging induces de novo rhythmic expression of oxidative stress-responsive genes
GSE81121	Transcriptomic comparison of Drosophila snRNP biogenesis mutants reveals mutant-specific changes in pre-mRNA processing: implications for Spinal Muscular Atrophy
GSE81159	The Tip60/NuA4 complex is required for proper cell cycle progression and the transition to a post-mitotic state in Drosophila melanogaster
GSE81795	An epigenetic mark of polycomb response elements implemented by Trx/MLL/COMPASS
GSE82151	Dachshund ChIP-seq in Drosophila Melanogaster 3rd instar imaginal eye discs
GSE83141	Lead Modulates trans- and cis-eQTLs in Drosophila melanogaster Heads
GSE83236	Piwi is required during Drosophila embryogenesis to license dual-strand piRNA clusters for transposon repression in adult ovaries [smallRNA-seq]
GSE83238	Piwi is required during Drosophila embryogenesis to license dual-strand piRNA clusters for transposon repression in adult ovaries
GSE83305	Stable Binding of the Conserved Transcription Factor Grainy Head to Its Target Genes Throughout Drosophila melanogaster Development
GSE83316	Natural variation of piRNA expression affects immunity to transposable elements
GSE83375	Dynamic regulation of chromatin signatures during Drosophila embryonic glial differentiation [RNA-Seq]
GSE83376	Dynamic regulation of chromatin signatures during Drosophila embryonic glial differentiation [ChIP-Seq]
GSE83377	Dynamic regulation of chromatin signatures during Drosophila embryonic glial differentiation
GSE83463	Chromatin profiling of Drosophila CNS subpopulations identifies active transcriptional enhancers
GSE83714	Context-dependent effects of HP1 assessed in high throughput
GSE83715	HP1
GSE83843	Characterization of active piRNAs and piRNA machinery in WRR-1 cells deficient for the Hippo pathway (deficient for the warts tumor suppressor) and expressing activated RasV12 (RNA-seq)
GSE83877	Characterization of active piRNAs and piRNA machinery in WRR-1 cells deficient for the Hippo pathway (deficient for the warts tumor suppressor) and expressing activated RasV12
GSE83914	Genome-wide transcriptional analysis of Drosophila ring gland
GSE85155	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [uvCLAP CLIP-seq]
GSE85164	DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome
GSE85806	The effect of sample splitting and technical replication on mRNA-seq and sRNA-seq quantification
GSE86055	Evolution of A-to-I RNA Editing in Drosophila
GSE86056	A-to-I RNA Editing in Drosophila
GSE86106	The Drosophila speciation factor HMR localizes to genomic insulator sites
GSE86114	Transcriptional profiling of zen homozygous and zen heterozygous Drosophila melanogaster embryos
GSE87022	Myeloid Leukemia Factor acts in a chaperone complex to regulate transcription factor stability and gene expression
GSE87346	Piwi interacts with chromatin at nuclear pores and promiscuously binds nuclear transcripts in Drosophila ovarian somatic cells
GSE87492	RNA-seq analysis of transcriptomic changes caused by Egg/dSETDB1 in Drosophila
GSE88774	Transcriptional and chromatin changes accompanying de novo formation of transgenic piRNA clusters
GSE88807	A prominent activation role of CtBP on HOX gene expression along PcG/trxG pathways
GSE89001	Transcriptomic Profiling of Early Drosophila Embryogenesis Reveals Similarities in Replication Checkpoint and Histone mRNA Processing Mutants
GSE89003	Drosophila Cbp80 is needed for the expression of piRNA components and piRNAs
GSE89137	miRNA expression profiling of alcohol exposure in Drosophila melanogaster
GSE89168	Transcriptomic screen to identify genes regulated by Store-operated calcium entry in Drosophila pupal nervous system
GSE89244	Evolutionary Principles Predict 3D Chromatin Organization
GSE89299	Drosophila melanogaster embryonic development RAMPAGE time series (Biological replicate #2)
GSE89335	Drosophila species embryonic development RAMPAGE time series
GSE89459	Genome wide binding of trr (ChIP-seq) and expression analysis (RNA-seq) of trr- and G9a mutant fly heads
GSE89496	RNA-seq of Drosophila 0-2 hr embryos Rnase R
GSE89845	Transcriptional response to Activating transcription factor 3 (Atf3) activity in the Drosophila eye antenna imaginal disc (EAD) epithelium.
GSE89993	Cell-type-specific gene expression profiling using ribosome affinity purification
GSE90572	Chromatin-seq and RNA-seq of dREAM subunit deficient Drosophila S2R+ cells
GSE90703	upSET, the Drosophila homologue of SET3, is required for viability and the proper balance of active and repressive chromatin marks
GSE90915	mRNA-seq in Drosophila larval fat body
GSE90916	ORC2 ChIP-seq in Drosophila larval fat body
GSE90917	mRNA-seq and ORC2 ChIP-seq in Drosophila larval fat body
GSE92350	Ectopic Drosophila AKH overexpression effect on gene expression in the 3rd instar larval fat body
GSE92389	Promoter-proximal pausing mediated by the exon junction complex regulates splicing
GSE92431	RNA-seq analysis of mutations inducing the loser status in Drosophila wing discs
GSE93763	Genome-wide maps of metabolic labeled RNA in Drosophila S2 cells.
GSE93806	Metabolic flexibility enables positive selection of mtDNA in Drosophila (RNA-seq)
GSE94115	The Drosophila Dosage Compensation Complex activates target genes via chromosome looping within the active compartment
GSE94293	RNA-seq analysis of gene expression in adult head of Canton-S and Bully lines
GSE94735	Pervasive epigenetic effects of Drosophila euchromatic transposable elements impact their evolution [ChIP-seq]
GSE94741	Pervasive epigenetic effects of Drosophila euchromatic transposable elements impact their evolution [RNA-seq]
GSE94742	Pervasive epigenetic effects of Drosophila euchromatic transposable elements impact their evolution
GSE94915	D. melanogaster eye-antennal imaginal discs developmental transcriptome
GSE94922	Nuclear Pores provide a scaffold for induced enhancer promoter contacts
GSE95226	The Trithorax group protein ASH1 requires a combination of BAH domain and AT hooks, but not the SET domain, for mitotic chromatin binding and survival
GSE95689	Widespread changes in nucleosome accessibility without changes in nucleosome occupancy during a rapid transcriptional induction
GSE96542	Probing the Canonicity of the Wnt/Wingless Signaling Pathway [STARR-seq]
GSE96549	The splicing co-factor Barricade/Tat-SF1, is required for cell cycle and lineage progression in Drosophila neural stem cells.
GSE96922	Histone gene replacement reveals a post-transcriptional role for H3K36 in maintaining metazoan transcriptome fidelity
GSE97162	Trans-Generational Hormesis and the Inheritance of Aging Resistance [ChIP-seq]
GSE97201	AKHR F1 heterozygous progeny of obese parents and controls, 10-11 days old adults
GSE97233	Trans-Generational Hormesis and the Inheritance of Aging Resistance [RNA-seq]
GSE97238	Trans-Generational Hormesis and the Inheritance of Aging Resistance
GSE97307	Total RNAseq of intestinal stem cells (ISCs) and progenitor cells (EBs) with expression of Lamin Dm0 and/or UPD
GSE97364	Twin-miRs and their many weak targets
GSE97525	F2 progeny of AKHR mutant and obese parents and controls, 10-11 days old adults
GSE97557	RNA transcriptome in Drosophila melanogaster embryos mutant for serine hydroxymethyl transferase (SHMT)
GSE98187	Flipping the switch on Sex-lethal expression: Sister of Sex-lethal antagonizes Sxl-dependent alternative splicing to maintain a male-specific gene expression pattern in Drosophila (RIP-Seq)
GSE98189	Flipping the switch on Sex-lethal expression: Sister of Sex-lethal antagonizes Sxl-dependent alternative splicing to maintain a male-specific gene expression pattern in Drosophila
GSE98966	Transcriptome analysis of bam- vs. Phf7-,bam- mutant testes
GSE98967	H3K4me2 and H3K4me3 profiles in the undifferentiated male germline
GSE98968	Transcriptome analysis of bam- vs. Phf7-,bam- mutant testes, and H3K4me2 and H3K4me3 profiles in the undifferentiated male germline
GSE98981	Key role of piRNAs in telomeric chromatin maintenance and telomere nuclear positioning in Drosophila germline
GSE99004	Linker histone H1 prevents R-loop accumulation and genome instability in heterochromatin [ChIP Seq]
GSE99014	Linker histone H1 prevents R-loop accumulation and genome instability in heterochromatin [DRIP-Seq]
GSE99016	Linker histone H1 prevents R-loop accumulation and genome instability in heterochromatin
GSE99023	RNA-seq of S2 cells after GFP (control), dKDM4A, or HP1a RNAi
GSE99027	ChIP-Seq of H3K9me3 and H3K36me3 after GFP or dKDM4A RNAi of S2 cells
GSE99105	TADs are 3D structural units of higher-order chromosome organization in Drosophila [male]
GSE99106	TADs are 3D structural units of higher-order chromosome organization in Drosophila [ph]
GSE99107	TADs are 3D structural units of higher-order chromosome organization in Drosophila
GSE99303	Glass promotes the differentiation of both neuronal and non-neuronal cells in the Drosophila eye
GSE99332	Next-generation sequencing facilitates metal homeostasis and intoxication studies
GSE99461	Genome-wide binding of Cyclin G in Drosophila melanogaster third instar larva wing imaginal discs.
GSE99462	Transcriptomic analysis of third instar larva wing imaginal discs deregulating Cyclin G in Drosophila melanogaster
GSE99545	Transcriptional profiling of adult Drosophila antennae by high-throughput sequencing
GSE99574	RNA-seq of sexed adult tissues/body parts from eight Drosophila species
GSE99642	Inflammation-modulated Metabolic Reprogramming is Required for DUOX-dependent Gut Immunity in Drosophila
GSE100214	Mitochondrial complex I-perturbed muscle remotely affects gene expression in the fat body in Drosophila
GSE100342	Fast evolution of gained essential function by a young gene through gained interaction with other essential genes [ChIP-Seq]
GSE100387	Pervasive genetic interactions modulate neurodevelopmental defects of the autism-associated 16p11.2 deletion in Drosophila melanogaster
GSE100419	Fast evolution of gained essential function by a young gene through gained interaction with other essential genes [RNA-Seq]
GSE100420	Fast evolution of gained essential function by a young gene through gained interaction with other essential genes
GSE100837	Comparative transcriptomics in the Drosophila Auditory Organ
GSE101060	NGS analysis of RNAs associated with the betaNACtes-containing ribosomes in Drosophila melanogaster testes
GSE101327	Dynamic placement of the linker histone H1 regulates nucleosome arrangement and coordinates gene transcription in early Drosophila embryos[ChIP-Seq]
GSE101328	Dynamic placement of the linker histone H1 regulates nucleosome arrangement and coordinates gene transcription in early Drosophila embryos[RNA-Seq]
GSE101330	Dynamic placement of the linker histone H1 regulates nucleosome arrangement and coordinates gene transcription in early Drosophila embryos
GSE101554	Genomic binding profiling upon expression of AbdA in S2 cells
GSE101555	Gene expression profiling of S2 cells and S2 cells expressing AbdA
GSE101556	Genomic binding profiling upon expression of Ubx in S2 cells
GSE101557	Expression of Hox transcription factors in Drosophila S2 cells
GSE101581	The cis-regulatory dynamics of embryonic development at single cell resolution
GSE101664	TRANSCRIPTIONAL RESPONSES OF ECOLOGICALLY DIVERSE DROSOPHILA SPECIES TO LARVAL DIETS DIFFERING IN RELATIVE SUGAR AND PROTEIN RATIOS
GSE101797	RNA-seq of regenerating blastema cells in Drosophila melanogaster
GSE101827	The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [ATAC-seq]
GSE102013	Recruitment of Armitage and Yb to a transcript triggers its phased processing into primary piRNAs in Drosophila ovaries
GSE102439	The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes [evolutionary study]
GSE102441	The transcription factor Grainyhead primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes
GSE102841	Time-course chromatin accessibility and transcriptome in regeneration
GSE103914	Identification of a conserved maternal-specific repressive domain in Zelda using Cas9-mediated mutagenesis
GSE104049	poly-A RNA profiling of Drosophila neural stem cells (type I NBs) and GMCs of different ages reveal genes involved in cell fate stabilization
GSE104059	Bivalent complexes of PRC1 with orthologs of BRD4 and MOZ/MORF target developmental genes in Drosophila
GSE104340	Drosophila transcription factors, Séance, Ouija board and Molting defective, cooperatively control ecdysone biosynthesis
GSE104706	Roles of female and male genotype in post-mating responses in Drosophila melanogaster
GSE104839	Capicua controls Toll/IL-1 signaling targets independently of RTK regulation
GSE104961	Single-cell absolute contact probability detection reveals chromosomes are organized by multiple low-frequency yet specific interactions
GSE106759	Context-dependent effects of Acf1 assessed in high throughput
GSE106866	Adult functions for the Drosophila DHR78 nuclear receptor
GSE106930	Transcriptional regulation of lipophorin receptors supports neuronal adaptation to chronic elevations of activity
GSE107247	Systematic transcriptomics reveals a biphasic mode of sarcomere morphogenesis in flight muscles regulated by Spalt
GSE107390	miR-975 overexpression effect on Drosophila cell lines
GSE108329	Piwi suppresses transcription of Brahma-dependent transposons via Maelstrom in ovarian somatic cells
GSE108472	Tissue-specific gene expression changes in l(3)mbt mutant ovaries [soma]
GSE108473	Tissue-specific gene expression changes in l(3)mbt mutant ovaries
GSE109370	Deregulation associated with cardiac conduction defects in Myotonic Dystrophy Type 1 using TU-Tagging
GSE109495	The large fraction of heterochromatin in Drosophila neurons is simultaneously bound by B-type lamin and HP1a
GSE110047	CG7358 mutant Drosophila melanogaster sequencing
GSE110082	The nuclear lamina maintains global spatial organization of chromatin in Drosophila
GSE110086	Run or die in the evolution of de novo microRNAs
GSE110240	Title: Transcriptional profiles (mRNA-seq) of Drosophila G9aDD1 mutants and control during 0, 6 and 12 hours of paraquat oxidative stress exposure.
GSE110331	Genome-wide study of the role of the histone demethylase dLsd1 in oogenesis
GSE112395	Myc and the Tip60 chromatin remodeling complex control neuroblast maintenance and polarity in Drosophila
GSE112633	TAF-ChIP: An ultra low input approach for genome wide chromatin immunoprecipitation assay
GSE112858	Evolution of maternal and zygotic mRNA complements in the early Drosophila embryo
GSE112864	RNA-seq analysis to assess transcriptional effects of Rp mutations in wing imaginal discs and their dependence on Xrp1
GSE112971	Somatic piRNA pathway prevents transgenerational germline transposition [smallRNA-seq]
GSE112972	Somatic piRNA pathway prevents transgenerational germline transposition
GSE113345	Associative appetitive olfactory conditioning with Sucrose or Sorbose in Drosophila at 4 hours post training.
GSE113346	Associative appetitive olfactory conditioning with Sucrose in Drosophila at 1 and 4 hours post training
GSE113347	Antimicrobial peptides modulate long-term memory
GSE113574	Dll and Sp1 ChIP-seq data from Drosophila third instar leg imaginal discs
GSE113728	Yki- and Ras-induced intestinal stem cells (ISCs) overproliferation affects gene expression in the midgut of adult flies
GSE114092	Collaborative repressive action of the antagonistic ETS transcription factors Pointed and Yan fine-tunes gene expression to confer robustness in Drosophila [ChIP-Seq]
GSE114209	Collaborative repressive action of the antagonistic ETS transcription factors Pointed and Yan fine-tunes gene expression to confer robustness in Drosophila
GSE115277	The SUMO ligase Su(var)2-10 induces co-transcriptional repression of piRNA targets
GSE115630	ChIP-seq for active enhancers marks at early regeneration
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