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Series GSE31550 Query DataSets for GSE31550
Status Public on Apr 03, 2012
Title DNA-Seq of DrosDel deficiency lines and w1118 lines
Organism Drosophila melanogaster
Experiment type Genome variation profiling by high throughput sequencing
Summary DNASeq reads from pools of female or male DrosDel and w1118 (parental strain for the Df/+ flies). Samples are named in this dataset according to the following sample naming scheme: tissue_genotype shorthand_sex_DNASeq_biological replicate #.
 
Overall design We sequenced DNA from pools of female or male DrosDel and w1118 (parental strain for the Df/+ flies).
 
Contributor(s) Malone JH, Cho DY, Mattiuzzo NR, Artieri CG, Jiang L, Dale RK, Smith HE, McDaniel J, Munro S, Salit M, Andrews J, Przytycka T, Oliver B
Citation(s) 22531030
Submission date Aug 19, 2011
Last update date May 15, 2019
Contact name Brian Oliver
E-mail(s) [email protected]
Phone 301-204-9463
Organization name NIDDK, NIH
Department LBG
Lab Developmental Genomics
Street address 50 South Drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (2)
GPL9061 Illumina Genome Analyzer II (Drosophila melanogaster)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (44)
GSM783089 Wholeflies_w1118_Female_DNASeq_R1
GSM783090 Wholeflies_w1118_Male_DNASeq_R1
GSM783091 Wholeflies_ED2809_Female_DNASeq_R1
This SubSeries is part of SuperSeries:
GSE31407 Drosophila DrosDel deficiency and diploid control flies
Relations
SRA SRP007888
BioProject PRJNA154979

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE31550_RAW.tar 29.8 Gb (http)(custom) TAR (of BAM)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
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