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| Status |
Public on Oct 30, 2014 |
| Title |
Identification of transcripts whose abundance changes in response to acute switches in DSX isoform |
| Organism |
Drosophila melanogaster |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
RNAseq of dissected adult fat body after DSX isoform is switched using temperature inducible alleles or constructs.
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| Overall design |
Biological duplicates were sequenced for each genotype at each condition.
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| Contributor(s) |
Clough E, Jimenez E, Kim Y, Whitworth C, Neville M, Hempel L, Pavlou H, Chen Z, Sturgill D, Dale R, Smith HE, Przytycka TM, Goodwin S, Van Doren M, Oliver B |
| Citation(s) |
25535918 |
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| Submission date |
Mar 12, 2014 |
| Last update date |
May 15, 2019 |
| Contact name |
Brian Oliver |
| E-mail(s) |
[email protected]
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| Phone |
301-204-9463
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| Organization name |
NIDDK, NIH
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| Department |
LBG
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| Lab |
Developmental Genomics
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| Street address |
50 South Drive
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| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
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| Platforms (1) |
| GPL13304 |
Illumina HiSeq 2000 (Drosophila melanogaster) |
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| Samples (24)
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| This SubSeries is part of SuperSeries: |
| GSE49480 |
Identifying targets of DSX with ChIP-seq, DamID-seq and DamID-chip and transcriptional response to DSX isoform switch |
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| Relations |
| BioProject |
PRJNA241132 |
| SRA |
SRP040032 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE55848_RAW.tar |
10.1 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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