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Series GSE77562 Query DataSets for GSE77562
Status Public on Feb 10, 2017
Title Ecdysone signaling induces two phases of cell cycle exit in Drosophila cells
Organism Drosophila melanogaster
Experiment type Expression profiling by high throughput sequencing
Summary Pulsed ecdysone signaling remodels cell cycle dynamics, causing distinct primary and secondary cell cycle arrests, similar to those observed in the wing during metamorphosis.
 
Overall design This was a timecourse transcriptome analysis of the Drosophila pupal wing during metamorphosis by RNAseq. Timepoints include the proliferative wandering L3 larval stage (-10h APF), the temporary G2 arrest (6h APF) the final cell cycle (18h APF) the permanent cell cycle arrest (24h APF), and stages of terminal differentiation including vein differentiation, wing hair formation and cuticle protein production (36 and 44h APF)
 
Contributor(s) Guo Y, Flegel K, Norman KL, Kumar J, McKay DJ, Buttitta LA
Citation(s) 27737823, 29126440
Submission date Feb 03, 2016
Last update date May 24, 2019
Contact name Daniel McKay
E-mail(s) [email protected]
Organization name University of North Carolina, Chapel Hill
Department Biology and Genetics
Lab McKay
Street address 250 Bell Tower Drive
City Chapel Hill
State/province NC
ZIP/Postal code 27599
Country USA
 
Platforms (1)
GPL13304 Illumina HiSeq 2000 (Drosophila melanogaster)
Samples (12)
GSM2054492 0hAPF_R1
GSM2054493 0hAPF_R2
GSM2054494 6hAPF_R1
Relations
BioProject PRJNA310853
SRA SRP069300

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77562_RAW.tar 720.0 Kb (http)(custom) TAR (of TAB)
GSE77562_RPKM_allgenes_alltimepoints.csv.gz 1.2 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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