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| Status |
Public on Nov 15, 2012 |
| Title |
Two isoforms of Fs(1)h ChIP-seq |
| Organism |
Drosophila melanogaster |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
ChIP-seq was performed using Drosophila Kc167 cells using antibodies against the two isoforms of Fs(1)h, the Brd4 homologue. Differences in binding patterns between the two isoforms are described.
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| Overall design |
We examined the differences in Fs(1)h isoform binding across the genome and describe the short isoform to be correlated with transcription at enhancers and promoters. The long isoform is found predominately at insulator binding sites where multiple insulators are bound.
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| Contributor(s) |
Corces VG, Kellner WA, Ramos E, Van Bortle K, Takenaka N, Li L |
| Citation(s) |
23945939 |
| |
| Submission date |
Nov 06, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Wendy A Kellner |
| E-mail(s) |
[email protected]
|
| Phone |
404-727-4250
|
| Organization name |
Emory University
|
| Department |
Biology
|
| Lab |
Victor Corces
|
| Street address |
1510 Clifton Road
|
| City |
Atlanta |
| State/province |
GA |
| ZIP/Postal code |
30322 |
| Country |
USA |
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| Platforms (1) |
| GPL13304 |
Illumina HiSeq 2000 (Drosophila melanogaster) |
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| Samples (3) |
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| Relations |
| BioProject |
PRJNA179097 |
| SRA |
SRP017086 |
