| Sample | Title | Value | Rank |
|---|
| GSM42559 | Control Proximal, Small Intestine 1 17 days old | 6.1 | 7 |
| GSM42561 | Control Proximal, Small Intestine 2 17 days old | 9.4 | 12 |
| GSM42563 | Control Proximal, Small Intestine 3 17 days old | 0.7 | 1 |
| GSM42553 | Control Distal, Small Intestine 1 17 days old | 5.7 | 8 |
| GSM42555 | Control Distal, Small Intestine 2 17 days old | 0.7 | 1 |
| GSM42557 | Control Distal, Small Intestine 3 17 days old | 3 | 4 |
| GSM42548 | Control Colon 1 17 days old | 1138.3 | 96 |
| GSM42550 | Control Colon 2 17 days old | 1265.7 | 97 |
| GSM42560 | Control Proximal, Small Intestine 1 21 days old | 1.2 | 1 |
| GSM42562 | Control Proximal, Small Intestine 2 21 days old | 8.6 | 11 |
| GSM42564 | Control Proximal, Small Intestine 3 21 days old | 1.9 | 2 |
| GSM42554 | Control Distal, Small Intestine 1 21 days old | 1.4 | 1 |
| GSM42556 | Control Distal, Small Intestine 2 21 days old | 6.3 | 9 |
| GSM42558 | Control Distal, Small Intestine 3 21 days old | 1.6 | 1 |
| GSM42549 | Control Colon 1 21 days old | 1271.5 | 97 |
| GSM42551 | Control Colon 2 21 days old | 1085.3 | 96 |
| GSM42552 | Control Colon 3 21 days old | 785.1 | 94 |
| GSM42541 | Amoxicillin treated Proximal, Small Intestine 1 17 days old | 11 | 11 |
| GSM42543 | Amoxicillin treated Proximal, Small Intestine 2 17 days old | 16.7 | 15 |
| GSM42546 | Amoxicillin treated Proximal, Small Intestine 3 17 days old | 5.8 | 7 |
| GSM42534 | Amoxicillin treated Distal, Small Intestine 1 17 days old | 2.7 | 4 |
| GSM42536 | Amoxicillin treated Distal, Small Intestine 2 17 days old | 7.1 | 9 |
| GSM42539 | Amoxicillin treated Distal, Small Intestine 3 17 days old | 6.4 | 8 |
| GSM42527 | Amoxicillin treated Colon 1 17 days old | 854.4 | 95 |
| GSM42529 | Amoxicillin treated Colon 2 17 days old | 831.5 | 94 |
| GSM42532 | Amoxicillin treated Colon 3 17 days old | 1060.5 | 96 |
| GSM42542 | Amoxicillin treated Proximal, Small Intestine 1 21 days old | 3.4 | 4 |
| GSM42544 | Amoxicillin treated Proximal, Small Intestine 2 21 days old | 2.7 | 3 |
| GSM42547 | Amoxicillin treated Proximal, Small Intestine 3 21 days old | 4.3 | 4 |
| GSM42535 | Amoxicillin treated Distal, Small Intestine 1 21 days old | 11.1 | 12 |
| GSM42537 | Amoxicillin treated Distal, Small Intestine 2 21 days old | 3.8 | 5 |
| GSM42540 | Amoxicillin treated Distal, Small Intestine 3 21 days old | 3.4 | 5 |
| GSM42528 | Amoxicillin treated Colon 1 21 days old | 1512.2 | 97 |
| GSM42530 | Amoxicillin treated Colon 2 21 days old | 934 | 95 |
| GSM42533 | Amoxicillin treated Colon 3 21 days old | 1239.7 | 97 |