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Sample GSM42536 Query DataSets for GSM42536
Status Public on Oct 04, 2005
Title Amoxicillin treated Distal, Small Intestine 2 17 days old
Sample type RNA
 
Source name Distal, Small Intestine 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 58.6 5.899339945
AFFX-DapX-5_at 16.2 4.09080882
1398787_at 1455.3 10.49986614
1367863_at 152.6 7.246580023
1374210_at 210.9 7.704646752
1374211_at 18 4.234007617
1374212_at 93.3 6.559649379
1389463_at 73.4 6.206353011
1389464_at 49.1 5.655742949
1374213_at 231.6 7.844364938
1374214_at 133.3 7.053768139
1389465_at 146.9 7.17709243
1374215_at 321 8.303757111
1374216_at 225.3 7.80583038
1367864_at 135.5 7.06527467
1389466_at 391.9 8.587888113
1374217_at 186 7.534444491
1374218_at 44.1 5.507936519
1389467_at 88 6.474370781
1374219_at 36.2 5.241820654

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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