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Sample GSM42554 Query DataSets for GSM42554
Status Public on Oct 04, 2005
Title Control Distal, Small Intestine 1 21 days old
Sample type RNA
 
Source name Distal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 46.5 5.572484842
AFFX-DapX-5_at 10.9 3.427936797
1398787_at 1169.5 10.19559213
1367863_at 137.8 7.113704059
1374210_at 174.6 7.444084197
1374211_at 13.6 3.782462963
1374212_at 101.1 6.687482726
1389463_at 69.8 6.147775299
1389464_at 127 7.02438826
1374213_at 139.2 7.123341892
1374214_at 102.2 6.685084331
1389465_at 268.8 8.05779109
1374215_at 253.9 7.973725121
1374216_at 153.1 7.262215586
1367864_at 194.9 7.601201715
1389466_at 342.4 8.397960425
1374217_at 295.6 8.217391112
1374218_at 33.8 5.113757536
1389467_at 43.6 5.47350777
1374219_at 48.3 5.611241879

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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