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Sample GSM42541 Query DataSets for GSM42541
Status Public on Oct 04, 2005
Title Amoxicillin treated Proximal, Small Intestine 1 17 days old
Sample type RNA
 
Source name Proximal, Small Intestine 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 52.7 5.587504587
AFFX-DapX-5_at 30.2 4.537126429
1398787_at 1136.6 10.16981691
1367863_at 130.5 6.992110471
1374210_at 213.5 7.723995437
1374211_at 25.8 4.392478767
1374212_at 111.8 6.706135685
1389463_at 108.5 6.683871569
1389464_at 3.6 1.674952811
1374213_at 227.3 7.802929092
1374214_at 125.5 6.929963135
1389465_at 309 8.271697223
1374215_at 320.7 8.328024799
1374216_at 155.2 7.249339283
1367864_at 265 8.03845615
1389466_at 335.3 8.402711441
1374217_at 283.3 8.104476531
1374218_at 57.6 5.646748635
1389467_at 126.4 6.885916349
1374219_at 5.8 2.240410717

Total number of rows: 15918

Table truncated, full table size 440 Kbytes.




Supplementary data files not provided

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