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Sample GSM42557 Query DataSets for GSM42557
Status Public on Oct 04, 2005
Title Control Distal, Small Intestine 3 17 days old
Sample type RNA
 
Source name Distal, Small Intestine 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 59.7 5.953626321
AFFX-DapX-5_at 11.8 3.680096926
1398787_at 1471.6 10.50215015
1367863_at 95.1 6.577046626
1374210_at 208.2 7.693410531
1374211_at 32.9 5.145091198
1374212_at 63.1 6.018765577
1389463_at 87.8 6.485132424
1389464_at 46 5.593235761
1374213_at 215.4 7.750088025
1374214_at 161.9 7.348124369
1389465_at 225.2 7.796289592
1374215_at 270.2 8.057036635
1374216_at 214.2 7.744028067
1367864_at 178.3 7.467865011
1389466_at 439.5 8.750491473
1374217_at 230.8 7.859741854
1374218_at 39.2 5.372052038
1389467_at 104.9 6.750796784
1374219_at 42.5 5.514208357

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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