NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM42535 Query DataSets for GSM42535
Status Public on Oct 04, 2005
Title Amoxicillin treated Distal, Small Intestine 1 21 days old
Sample type RNA
 
Source name Distal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 58 5.930488708
AFFX-DapX-5_at 6.2 2.726768345
1398787_at 1396.9 10.38906575
1367863_at 117.1 6.909805775
1374210_at 176 7.483526594
1374211_at 24.5 4.707292703
1374212_at 97.8 6.675528977
1389463_at 79.1 6.362508332
1389464_at 116.9 6.949510772
1374213_at 112 6.839431021
1374214_at 162.4 7.384733082
1389465_at 317.9 8.323881292
1374215_at 218.6 7.780709499
1374216_at 194.4 7.636913859
1367864_at 199.8 7.664389148
1389466_at 363.7 8.501253562
1374217_at 239.4 7.944672109
1374218_at 43.3 5.520775768
1389467_at 56.3 5.878013046
1374219_at 28.2 4.91014977

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap