NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM42555 Query DataSets for GSM42555
Status Public on Oct 04, 2005
Title Control Distal, Small Intestine 2 17 days old
Sample type RNA
 
Source name Distal, Small Intestine 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 46 5.574162561
AFFX-DapX-5_at 7.1 3.018262205
1398787_at 1391.8 10.39443409
1367863_at 150.2 7.226099052
1374210_at 187.6 7.532377004
1374211_at 20.3 4.48317642
1374212_at 88.2 6.49500249
1389463_at 70.3 6.155954357
1389464_at 56.7 5.897637208
1374213_at 185.4 7.523174008
1374214_at 152.3 7.249780518
1389465_at 254.1 7.959489289
1374215_at 349 8.415164291
1374216_at 214.3 7.734224753
1367864_at 172.7 7.411061914
1389466_at 452.8 8.781781304
1374217_at 141.8 7.146803218
1374218_at 28 4.894694786
1389467_at 98.3 6.649913387
1374219_at 37.1 5.352440037

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap