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Sample GSM42562 Query DataSets for GSM42562
Status Public on Oct 04, 2005
Title Control Proximal, Small Intestine 2 21 days old
Sample type RNA
 
Source name Proximal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 54.6 5.930178283
AFFX-DapX-5_at 14 4.028699071
1398787_at 1519.5 10.4783836
1367863_at 115 6.917176341
1374210_at 189.1 7.601002643
1374211_at 12.4 3.847130857
1374212_at 61 6.067022908
1389463_at 73.1 6.310317796
1389464_at 24.6 4.801156486
1374213_at 312.9 8.346414724
1374214_at 138.3 7.190986206
1389465_at 268.9 8.080193412
1374215_at 240.3 7.911610093
1374216_at 107.9 6.81510085
1367864_at 161 7.363997009
1389466_at 330.8 8.343561387
1374217_at 299.3 8.304943625
1374218_at 35.3 5.333426242
1389467_at 58.7 6.009445274
1374219_at 16.2 4.232615586

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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