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Sample GSM42544 Query DataSets for GSM42544
Status Public on Oct 04, 2005
Title Amoxicillin treated Proximal, Small Intestine 2 21 days old
Sample type RNA
 
Source name Proximal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 67.6 6.21882229
AFFX-DapX-5_at 8.7 3.261093929
1398787_at 1550.6 10.45901552
1367863_at 130.9 7.120361602
1374210_at 169 7.463078117
1374211_at 16.8 4.220061223
1374212_at 70 6.257947607
1389463_at 87.6 6.571575582
1389464_at 41.9 5.536756399
1374213_at 230.8 7.927563923
1374214_at 183.3 7.611523416
1389465_at 278 8.156322544
1374215_at 237.9 7.925701804
1374216_at 154.9 7.355797442
1367864_at 196.5 7.676532337
1389466_at 327.8 8.358688883
1374217_at 219.2 7.869680595
1374218_at 48.8 5.759573392
1389467_at 56.5 5.947706669
1374219_at 11.8 3.710477861

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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