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Sample GSM42564 Query DataSets for GSM42564
Status Public on Oct 04, 2005
Title Control Proximal, Small Intestine 3 21 days old
Sample type RNA
 
Source name Proximal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 62.4 6.097321914
AFFX-DapX-5_at 12.4 3.884113664
1398787_at 1617.8 10.56691924
1367863_at 179.2 7.536266971
1374210_at 187.1 7.57062485
1374211_at 14.8 4.107055638
1374212_at 87.1 6.554231462
1389463_at 86.5 6.527071072
1389464_at 11.4 3.670192875
1374213_at 257 8.044039405
1374214_at 138.3 7.169015556
1389465_at 205.7 7.684338538
1374215_at 284.6 8.147700436
1374216_at 144.8 7.220235679
1367864_at 190.1 7.589596141
1389466_at 310.9 8.252172258
1374217_at 226.6 7.881505051
1374218_at 38.6 5.445348968
1389467_at 44.3 5.576749606
1374219_at 4.4 2.3565403

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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