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Sample GSM42559 Query DataSets for GSM42559
Status Public on Oct 04, 2005
Title Control Proximal, Small Intestine 1 17 days old
Sample type RNA
 
Source name Proximal, Small Intestine 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 65.6 6.143325318
AFFX-DapX-5_at 16.7 3.945775179
1398787_at 1053.4 9.983548894
1367863_at 187.7 7.696125412
1374210_at 213 7.87205855
1374211_at 24.6 4.588555231
1374212_at 49.5 5.756560435
1389463_at 117.9 7.017840062
1389464_at 4.9 2.37123821
1374213_at 349.4 8.590823508
1374214_at 46.2 5.673854892
1389465_at 236.2 8.008695346
1374215_at 341.5 8.536914224
1374216_at 187.3 7.692041434
1367864_at 190.2 7.707035517
1389466_at 332 8.474732266
1374217_at 484.9 9.065576036
1374218_at 34.7 5.172529378
1389467_at 77.7 6.408382996
1374219_at 41.3 5.337193866

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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