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Sample GSM42558 Query DataSets for GSM42558
Status Public on Oct 04, 2005
Title Control Distal, Small Intestine 3 21 days old
Sample type RNA
 
Source name Distal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 61.9 5.960768906
AFFX-DapX-5_at 17.9 3.973127566
1398787_at 1443 10.41991696
1367863_at 146.3 7.227459247
1374210_at 183.9 7.552472907
1374211_at 8.4 2.961901525
1374212_at 76.1 6.273315767
1389463_at 99.7 6.669593202
1389464_at 63.4 5.972401481
1374213_at 117 6.903579542
1374214_at 169.9 7.443479156
1389465_at 241.7 7.938088786
1374215_at 277.2 8.13335155
1374216_at 218.2 7.803313565
1367864_at 251.5 8.002903073
1389466_at 357.6 8.486942675
1374217_at 126.3 7.015649792
1374218_at 37 5.176927562
1389467_at 69.2 6.137162477
1374219_at 27.2 4.658096229

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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