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Sample GSM42553 Query DataSets for GSM42553
Status Public on Oct 04, 2005
Title Control Distal, Small Intestine 1 17 days old
Sample type RNA
 
Source name Distal, Small Intestine 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 53.3 5.806259974
AFFX-DapX-5_at 9.8 3.4541518
1398787_at 1533.9 10.55463408
1367863_at 95.4 6.585032283
1374210_at 213.2 7.728836145
1374211_at 22.2 4.614448519
1374212_at 66.7 6.110332223
1389463_at 82.7 6.407465334
1389464_at 54.4 5.857165518
1374213_at 179.1 7.486156736
1374214_at 149.8 7.240166555
1389465_at 226.1 7.802026991
1374215_at 294.7 8.182043779
1374216_at 207.4 7.700138285
1367864_at 169.2 7.393228504
1389466_at 454.4 8.797724288
1374217_at 222.9 7.813617996
1374218_at 47.9 5.68701464
1389467_at 77.4 6.323334014
1374219_at 39.3 5.438049636

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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