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Sample GSM42548 Query DataSets for GSM42548
Status Public on Oct 04, 2005
Title Control Colon 1 17 days old
Sample type RNA
 
Source name Colon 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 53.4 5.585106289
AFFX-DapX-5_at 12.9 3.588330814
1398787_at 1312.2 10.51557746
1367863_at 209.3 7.617981986
1374210_at 169.1 7.342335138
1374211_at 31.1 4.818326154
1374212_at 78 6.144109569
1389463_at 98.4 6.491171971
1389464_at 127.1 6.829564464
1374213_at 123.4 6.869404692
1374214_at 177.2 7.371037753
1389465_at 336.8 8.366664271
1374215_at 266.5 8.036013149
1374216_at 139.3 7.039859173
1367864_at 272.4 8.035172221
1389466_at 450.3 8.82769282
1374217_at 29.2 4.769554752
1374218_at 35.6 4.993311942
1389467_at 94.2 6.417693148
1374219_at 11.9 3.431952917

Total number of rows: 15918

Table truncated, full table size 440 Kbytes.




Supplementary data files not provided

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