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Sample GSM42551 Query DataSets for GSM42551
Status Public on Oct 04, 2005
Title Control Colon 2 21 days old
Sample type RNA
 
Source name Colon 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 48.2 5.534062637
AFFX-DapX-5_at 11.5 3.484670897
1398787_at 1413.7 10.59074691
1367863_at 155.1 7.239765468
1374210_at 210.4 7.693260039
1374211_at 21.9 4.405188522
1374212_at 81.5 6.294523345
1389463_at 102.3 6.625858588
1389464_at 103 6.629380744
1374213_at 108.6 6.731156497
1374214_at 200.2 7.605380474
1389465_at 264.7 8.038822319
1374215_at 225 7.807957859
1374216_at 128.5 6.972072427
1367864_at 264.1 8.023469864
1389466_at 364.1 8.521100114
1374217_at 25.2 4.615378753
1374218_at 32.8 4.979664676
1389467_at 126.7 6.931419459
1374219_at 5.4 2.385164097

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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