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Sample GSM42537 Query DataSets for GSM42537
Status Public on Oct 04, 2005
Title Amoxicillin treated Distal, Small Intestine 2 21 days old
Sample type RNA
 
Source name Distal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 60.4 5.947944587
AFFX-DapX-5_at 13.3 3.754079313
1398787_at 1424.3 10.40734359
1367863_at 135.8 7.104550296
1374210_at 181.7 7.51670475
1374211_at 15.5 3.980813215
1374212_at 86.6 6.465885231
1389463_at 67.1 6.095650413
1389464_at 52.1 5.735121598
1374213_at 124.6 6.977094389
1374214_at 150.6 7.255351199
1389465_at 285.2 8.158927007
1374215_at 305.8 8.257524938
1374216_at 161.6 7.353289477
1367864_at 185.8 7.547594587
1389466_at 382.2 8.568803681
1374217_at 166.1 7.396714553
1374218_at 35.5 5.181139456
1389467_at 84.5 6.430238944
1374219_at 31.7 5.01310536

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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