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Sample GSM42563 Query DataSets for GSM42563
Status Public on Oct 04, 2005
Title Control Proximal, Small Intestine 3 17 days old
Sample type RNA
 
Source name Proximal, Small Intestine 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 61.7 6.005605509
AFFX-DapX-5_at 8.6 3.136002931
1398787_at 1269 10.31499674
1367863_at 189.9 7.616593898
1374210_at 200.9 7.688660617
1374211_at 29.9 4.94249577
1374212_at 79 6.361875256
1389463_at 120.4 6.968062185
1389464_at 19.2 4.319013278
1374213_at 330.2 8.410891379
1374214_at 50.1 5.696033033
1389465_at 238.9 7.929477164
1374215_at 304.4 8.276900567
1374216_at 101.9 6.715951504
1367864_at 242.6 7.959276507
1389466_at 341.7 8.43344261
1374217_at 296.8 8.262679385
1374218_at 44 5.512543667
1389467_at 85.3 6.472421888
1374219_at 17.2 4.144917293

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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