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Sample GSM42556 Query DataSets for GSM42556
Status Public on Oct 04, 2005
Title Control Distal, Small Intestine 2 21 days old
Sample type RNA
 
Source name Distal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 53.9 5.784392764
AFFX-DapX-5_at 11.3 3.645357546
1398787_at 1366.8 10.38317624
1367863_at 184 7.516114425
1374210_at 149.9 7.211446778
1374211_at 19.5 4.390653297
1374212_at 91.2 6.529226924
1389463_at 76.9 6.274580218
1389464_at 91.1 6.558805961
1374213_at 105.6 6.71079584
1374214_at 145.3 7.177812626
1389465_at 253.2 7.961660461
1374215_at 316.2 8.281048012
1374216_at 155.9 7.274092738
1367864_at 200 7.626315097
1389466_at 318.5 8.286825031
1374217_at 239.8 7.900662707
1374218_at 30.5 4.992359294
1389467_at 63.3 6.001286463
1374219_at 25 4.748542667

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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