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Sample GSM42560 Query DataSets for GSM42560
Status Public on Oct 04, 2005
Title Control Proximal, Small Intestine 1 21 days old
Sample type RNA
 
Source name Proximal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 62.5 5.964671059
AFFX-DapX-5_at 14 3.692989445
1398787_at 1414 10.38007089
1367863_at 193.9 7.632036308
1374210_at 186.6 7.578383515
1374211_at 21.9 4.375124716
1374212_at 91.3 6.525576761
1389463_at 101 6.679198305
1389464_at 25.9 4.675274538
1374213_at 169.5 7.439431563
1374214_at 108.3 6.790606221
1389465_at 209.4 7.741762883
1374215_at 320.2 8.353235295
1374216_at 125.5 7.005497703
1367864_at 221.4 7.824883059
1389466_at 248.9 7.9808681
1374217_at 287.9 8.201112518
1374218_at 36.8 5.168836092
1389467_at 46.4 5.550159677
1374219_at 22.1 4.388784806

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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