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Sample GSM42534 Query DataSets for GSM42534
Status Public on Oct 04, 2005
Title Amoxicillin treated Distal, Small Intestine 1 17 days old
Sample type RNA
 
Source name Distal, Small Intestine 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 45.7 5.632020415
AFFX-DapX-5_at 6.6 2.99108132
1398787_at 1697.6 10.66236712
1367863_at 133.8 7.092781389
1374210_at 198.6 7.637562374
1374211_at 3.6 2.076710737
1374212_at 65.7 6.127506228
1389463_at 93 6.609924349
1389464_at 57.2 5.987254389
1374213_at 203.4 7.685571434
1374214_at 141.2 7.176647348
1389465_at 286.4 8.146977496
1374215_at 363.5 8.487036387
1374216_at 220.4 7.804920062
1367864_at 131.1 7.035000438
1389466_at 445.8 8.764902821
1374217_at 256.1 8.035751937
1374218_at 27.3 4.940243455
1389467_at 99.8 6.728273593
1374219_at 34.5 5.336589252

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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