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Sample GSM42549 Query DataSets for GSM42549
Status Public on Oct 04, 2005
Title Control Colon 1 21 days old
Sample type RNA
 
Source name Colon 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 49 5.532290749
AFFX-DapX-5_at 5.8 2.396350332
1398787_at 1414.7 10.55194139
1367863_at 150.6 7.206488424
1374210_at 250.4 7.961244803
1374211_at 21.7 4.315486966
1374212_at 80 6.253863322
1389463_at 105.5 6.663991919
1389464_at 79.1 6.209511921
1374213_at 117.3 6.855271704
1374214_at 99.4 6.602316607
1389465_at 299.7 8.239007479
1374215_at 339.2 8.421763355
1374216_at 163.9 7.334933091
1367864_at 283.7 8.144512626
1389466_at 319.1 8.352963246
1374217_at 24.3 4.569923505
1374218_at 32.5 4.918534544
1389467_at 126.5 6.916243614
1374219_at 17.3 3.988783451

Total number of rows: 15918

Table truncated, full table size 440 Kbytes.




Supplementary data files not provided

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