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Sample GSM42547 Query DataSets for GSM42547
Status Public on Oct 04, 2005
Title Amoxicillin treated Proximal, Small Intestine 3 21 days old
Sample type RNA
 
Source name Proximal, Small Intestine 21 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 70.2 6.075201499
AFFX-DapX-5_at 5.5 2.235779383
1398787_at 1557.3 10.54484562
1367863_at 131.3 7.037172296
1374210_at 217 7.771457668
1374211_at 23.5 4.385415092
1374212_at 89.7 6.450670745
1389463_at 92.4 6.506560099
1389464_at 15.6 3.878000139
1374213_at 250.1 7.971682106
1374214_at 114.8 6.840461234
1389465_at 249.9 7.978709119
1374215_at 317 8.322068334
1374216_at 159.6 7.322219251
1367864_at 270.3 8.089230521
1389466_at 291 8.196687151
1374217_at 300.3 8.227674938
1374218_at 23.4 4.443893738
1389467_at 92.5 6.496735071
1374219_at 30.6 4.767076421

Total number of rows: 15918

Table truncated, full table size 440 Kbytes.




Supplementary data files not provided

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