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Sample GSM42546 Query DataSets for GSM42546
Status Public on Oct 04, 2005
Title Amoxicillin treated Proximal, Small Intestine 3 17 days old
Sample type RNA
 
Source name Proximal, Small Intestine 17 days old
Organism Rattus norvegicus
Extracted molecule total RNA
 
Description Whole tissues corresponding to the proximal and distal small intestine and to the colon were dissected from each rat, washed with ice-cold saline solution and immediately frozen in liquid nitrogen. Rats were either control or treated with Amoxicillin (100mg/kg/day). Small intestine was divided in two identical length considered as the proximal and distal part. In each intestinal part 1 cm of tissue was taken in the middle of this part to perform the RNA extraction and then the GeneArray analysis.
Keywords = gastrointestinal tract, microarray, antibiotic, suckling rats, amoxicillin
 
Submission date Feb 17, 2005
Last update date Oct 04, 2005
Contact name Alexandra Schumann
E-mail(s) [email protected]
Phone + 41 21 785 93 39
Fax + 41 21 785 85 44
Organization name Nestle Research Center
Department Nutrition and Health
Lab Digestive Health
Street address PO box 44
City Vers-chez-les-Blancs
ZIP/Postal code 1000
Country Switzerland
 
Platform ID GPL341
Series (1)
GSE2354 Effect of Amoxicillin on the small intestine and colon of rats

Data table header descriptions
ID_REF
VALUE MAS5 scaled ADI
LOG log 2 normalized ADI

Data table
ID_REF VALUE LOG
AFFX-BioB-5_at 66.5 6.046044413
AFFX-DapX-5_at 28.6 4.768928656
1398787_at 1337.2 10.39979726
1367863_at 163.4 7.338678107
1374210_at 206.6 7.673688379
1374211_at 28.2 4.779935691
1374212_at 70 6.120481873
1389463_at 131.9 7.033750957
1389464_at 10.3 3.352265893
1374213_at 342.2 8.403591302
1374214_at 145.2 7.169076977
1389465_at 285.3 8.136787308
1374215_at 281.7 8.118011236
1374216_at 185.4 7.519875108
1367864_at 239.8 7.888204101
1389466_at 329.8 8.344199724
1374217_at 379.7 8.555911938
1374218_at 54.7 5.757493094
1389467_at 101.6 6.65790428
1374219_at 14.5 3.82065087

Total number of rows: 15918

Table truncated, full table size 439 Kbytes.




Supplementary data files not provided

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