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Platform GPL14951 Query DataSets for GPL14951
Status Public on Dec 02, 2011
Title Illumina HumanHT-12 WG-DASL V4.0 R2 expression beadchip
Technology type oligonucleotide beads
Distribution commercial
Organism Homo sapiens
Manufacturer Illumina Inc.
Manufacture protocol see manufacturer's website
 
 
Submission date Dec 02, 2011
Last update date Dec 22, 2017
Contact name GEO admin
E-mail(s) [email protected]
Organization name NCBI/NLM/NIH
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (8763) GSM841875, GSM841876, GSM841877, GSM841878, GSM841879, GSM841880 
Series (154)
GSE28024 Human oocytes reprogram somatic cells to a pluripotent state
GSE34105 Gene expression profiling of archival tongue carcinoma and normal tongue tissue (all samples)
GSE34106 Gene expression profiling of archival tongue carcinoma and normal tongue tissue (subset)
Relations
Alternative to GPL18281

Data table header descriptions
ID Unique identifier for the probe (across all products and species)
Transcript Internal transcript id
Species
Source Transcript sequence source name
Search_Key Internal id useful for custom design array
ILMN_Gene Internal gene symbol
Source_Reference_ID Id in the source database
RefSeq_ID Refseq id
Entrez_Gene_ID Entrez gene id
GI Genbank id
Accession Genbank accession number
Symbol Gene symbol from the source database
Protein_Product Genbank protein accession number
Array_Address_Id Decoder id
Probe_Type Information about what this probe is targeting
Probe_Start Position of the probe relative to the 5' of the source transcript sequence
SEQUENCE Probe sequence
Chromosome Chromosome
Probe_Chr_Orientation Orientation on the NCBI genome built
Probe_Coordinates genomic position of the probe on the NCBI genome build 36 version 3
Cytoband
Definition Gene description from the source
Ontology_Component Cellular component annotations from Gene Ontology project
Ontology_Process Biological process annotations from Gene Ontology project
Ontology_Function Molecular function annotations from Gene Ontology project
Synonyms Gene symbol synonyms from Refseq
Obsolete_Probe_Id Identifier of probe id before bgx time
GB_ACC GenBank accession

Data table
ID Transcript Species Source Search_Key ILMN_Gene Source_Reference_ID RefSeq_ID Entrez_Gene_ID GI Accession Symbol Protein_Product Array_Address_Id Probe_Type Probe_Start SEQUENCE Chromosome Probe_Chr_Orientation Probe_Coordinates Cytoband Definition Ontology_Component Ontology_Process Ontology_Function Synonyms Obsolete_Probe_Id GB_ACC
ILMN_3166687 ILMN_333737 ILMN Controls ILMN_Controls ERCC-00162 ERCC-00162 ERCC-00162 DQ516750 ERCC-00162 5270161 S 12 CCCATGTGTCCAATTCTGAATATCTTTCCAGCTAAGTGCTTCTGCCCACC Methanocaldococcus jannaschii spike-in control MJ-500-33 genomic sequence DQ516750
ILMN_3165566 ILMN_333646 ILMN Controls ILMN_Controls ERCC-00071 ERCC-00071 ERCC-00071 DQ883654 ERCC-00071 4260594 S 224 GGATTAACTGCTGTGGTGTGTCATACTCGGCTACCTCCTGGTTTGGCGTC Synthetic construct clone NISTag13 external RNA control sequence DQ883654
ILMN_3164811 ILMN_333584 ILMN Controls ILMN_Controls ERCC-00009 ERCC-00009 ERCC-00009 DQ668364 ERCC-00009 7610424 S 868 GACCACGCCTTGTAATCGTATGACACGCGCTTGACACGACTGAATCCAGC Synthetic construct clone TagJ microarray control DQ668364
ILMN_3165363 ILMN_333628 ILMN Controls ILMN_Controls ERCC-00053 ERCC-00053 ERCC-00053 DQ516785 ERCC-00053 5260356 S 873 CTGCAATGCCATTAACAACCTTAGCACGGTATTTCCAGTAGCTGGTGAGC Methanocaldococcus jannaschii spike-in control MJ-1000-68 genomic sequence DQ516785
ILMN_3166511 ILMN_333719 ILMN Controls ILMN_Controls ERCC-00144 ERCC-00144 ERCC-00144 DQ854995 ERCC-00144 2030196 S 130 CGTGCAGACAGGGATCGTAAGGCGATCCAGCCGGTATACCTTAGTCACAT Synthetic construct clone AG006.1100 external RNA control sequence DQ854995
ILMN_3164754 ILMN_333578 ILMN Controls ILMN_Controls ERCC-00003 ERCC-00003 ERCC-00003 DQ516784 ERCC-00003 3170364 S 14 GGCAGAGGCGTTTGTATCTGCCATTATAAAGAAGTTTCCTCCAGCAACTC Methanocaldococcus jannaschii spike-in control MJ-1000-67 genomic sequence DQ516784
ILMN_3166432 ILMN_333713 ILMN Controls ILMN_Controls ERCC-00138 ERCC-00138 ERCC-00138 DQ516777 ERCC-00138 6550376 S 161 AGTTGCTGGAGTAGAGCTTGGTTCTGTCCCTATAGCTACAGCTGTCTCAT Methanocaldococcus jannaschii spike-in control MJ-1000-60 genomic sequence DQ516777
ILMN_3165742 ILMN_333659 ILMN Controls ILMN_Controls ERCC-00084 ERCC-00084 ERCC-00084 DQ883682 ERCC-00084 1400451 S 642 CGGTATCTACCAGCAAAACATAGGAGCGTGGCCGAAACTGGGTCACTGAG Synthetic construct clone NISTag41 external RNA control sequence DQ883682
ILMN_3164913 ILMN_333592 ILMN Controls ILMN_Controls ERCC-00017 ERCC-00017 ERCC-00017 DQ459420 ERCC-00017 2320341 S 808 GTCAATACGATAATGCGCCCAAAACGAGGGATCGAGACGGTCGGAGTGGC Bases different from GenBank: 5 DQ459420
ILMN_3165408 ILMN_333632 ILMN Controls ILMN_Controls ERCC-00057 ERCC-00057 ERCC-00057 DQ668366 ERCC-00057 1820014 S 732 ACGCGAGTTAGACCGTATCGTCCCCAGTGCCCTAAGATGGTCAAGCGTGC Synthetic construct clone TagQ microarray control DQ668366
ILMN_3165203 ILMN_333616 ILMN Controls ILMN_Controls ERCC-00041 ERCC-00041 ERCC-00041 EF011069 ERCC-00041 2190670 S 631 CTTCCTCGCGCATGGCTTGAAGAAGGCTCTTACAACTTCAGCTTTAGCGG Synthetic construct spike-in microarray control O-sialoglycoprotein endopeptidase (gcp) gene, complete cds EF011069
ILMN_3166630 ILMN_333731 ILMN Controls ILMN_Controls ERCC-00156 ERCC-00156 ERCC-00156 DQ883643 ERCC-00156 2750053 S 193 CCCGAGGTAGACTATCTTCCAGATGATGCCATACGTTCACTCAATCGCGC Synthetic construct clone NISTag2 external RNA control sequence DQ883643
ILMN_3165619 ILMN_333650 ILMN Controls ILMN_Controls ERCC-00075 ERCC-00075 ERCC-00075 DQ516778 ERCC-00075 70477 S 900 CCCTAATCCCATACTTACAGATTGTGTGCTCATGACTTCCACAGACGTGC Methanocaldococcus jannaschii spike-in control MJ-1000-61 genomic sequence DQ516778
ILMN_3165933 ILMN_333674 ILMN Controls ILMN_Controls ERCC-00099 ERCC-00099 ERCC-00099 DQ875387 ERCC-00099 2710279 S 1245 TTGATTCCAGGGGCCATGCAGGAGCTTGAAGCACTCGGCTGCAAAGTGAG Synthetic construct microarray control PHE gene, complete sequence DQ875387
ILMN_3164979 ILMN_333597 ILMN Controls ILMN_Controls ERCC-00022 ERCC-00022 ERCC-00022 DQ855004 ERCC-00022 1070725 S 394 GTAAGCCGGCGACATATCTAGCAAAACATAGTCCCCCTTCTGCTCAGAGG Synthetic construct clone AG019.0111 external RNA control sequence DQ855004
ILMN_3166789 ILMN_333745 ILMN Controls ILMN_Controls ERCC-00170 ERCC-00170 ERCC-00170 DQ516773 ERCC-00170 6590497 S 295 GTTGGAGACCCATTGCAGGCAGGGGTTTTAGCTGTTATGGCTATTGCTGA Methanocaldococcus jannaschii spike-in control MJ-1000-56 genomic sequence DQ516773
ILMN_3165040 ILMN_333603 ILMN Controls ILMN_Controls ERCC-00028 ERCC-00028 ERCC-00028 DQ459419 ERCC-00028 1110398 S 876 CCCCTCTGCACGAACTATAGATACGTCTTTCATCGGTACGCTCGAAAGCG Bases different from GenBank: 12 DQ459419
ILMN_3165699 ILMN_333656 ILMN Controls ILMN_Controls ERCC-00081 ERCC-00081 ERCC-00081 DQ854991 ERCC-00081 290433 S 285 CGTCGCTTAAACGTTGGTTCAGGGCTCCATATATACATCTGCCGTGCCCC Bases different from GenBank: 2 DQ854991
ILMN_3165215 ILMN_333617 ILMN Controls ILMN_Controls ERCC-00042 ERCC-00042 ERCC-00042 DQ516783 ERCC-00042 650608 S 544 GCCCTCCAATCCAGGCTTAGCTCCCTGCCCTATTTTAATCTCTATTGCAG Methanocaldococcus jannaschii spike-in control MJ-1000-66 genomic sequence DQ516783
ILMN_3166404 ILMN_333711 ILMN Controls ILMN_Controls ERCC-00136 ERCC-00136 ERCC-00136 EF011063 ERCC-00136 6550369 S 936 GAAGAACTTGGACTCGGACTTCGCAAAGACGATGACTAGTTTCCCTTGTG Synthetic construct spike-in microarray control DNA-directed RNA polymerase alpha subunit (rpoA) gene, complete cds EF011063

Total number of rows: 29377

Table truncated, full table size 60270 Kbytes.




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