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Sample GSM856099 Query DataSets for GSM856099
Status Public on Jan 22, 2013
Title Blood 6
Sample type RNA
 
Source name Human blood
Organism Homo sapiens
Characteristics physiological specimen: Blood
ethnic group: Korean
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy mini kit or QIAGEN RNeasy Protect Saliva mini kit (saliva) in accordance with the prescribed protocol provided with the kit. Quality control was performed with Experion (BIO-RAD).
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 6
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Jan 04, 2012
Last update date Jan 22, 2013
Contact name Seon-Young Kim
E-mail(s) [email protected]
Phone 82-42-879-8116
Organization name Korea Research Institute of Bioscience and Biotechnology
Department Genome Research Center
Lab Human Genomics
Street address 52 Eoeun-dong, Yuseong-gu
City Daejon
ZIP/Postal code 305333
Country South Korea
 
Platform ID GPL14951
Series (1)
GSE34844 Genome-wide mRNA profiling for identification of specific body fluid markers

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 354.182 0.05517241
ILMN_2055271 307.8026 0.3586207
ILMN_2383229 304.4604 0.3758621
ILMN_1806310 169.5072 1
ILMN_1779670 280.0847 0.5793104
ILMN_1717783 367.9161 0.03103448
ILMN_1814316 281.1399 0.5689655
ILMN_2359168 294.0504 0.437931
ILMN_1731507 240.0001 0.8931034
ILMN_1787689 316.5943 0.3034483
ILMN_3241953 384.8944 0.01034483
ILMN_1745607 285.1149 0.5310345
ILMN_2136495 326.7554 0.2413793
ILMN_1668111 255.176 0.7931035
ILMN_2295559 207.7881 0.9689655
ILMN_1735045 289.6867 0.4862069
ILMN_1680754 173.4277 1
ILMN_2375184 235.9331 0.9103448
ILMN_1659452 293.2675 0.4482759
ILMN_1767388 327.4536 0.2413793

Total number of rows: 29377

Table truncated, full table size 850 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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