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Sample GSM856105 Query DataSets for GSM856105
Status Public on Jan 22, 2013
Title Semen 6
Sample type RNA
 
Source name Human semen
Organism Homo sapiens
Characteristics physiological specimen: Semen
ethnic group: Korean
gender: male
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy mini kit or QIAGEN RNeasy Protect Saliva mini kit (saliva) in accordance with the prescribed protocol provided with the kit. Quality control was performed with Experion (BIO-RAD).
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 6
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Jan 04, 2012
Last update date Jan 22, 2013
Contact name Seon-Young Kim
E-mail(s) [email protected]
Phone 82-42-879-8116
Organization name Korea Research Institute of Bioscience and Biotechnology
Department Genome Research Center
Lab Human Genomics
Street address 52 Eoeun-dong, Yuseong-gu
City Daejon
ZIP/Postal code 305333
Country South Korea
 
Platform ID GPL14951
Series (1)
GSE34844 Genome-wide mRNA profiling for identification of specific body fluid markers

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 252.475 0.8041958
ILMN_2055271 297.5525 0.4160839
ILMN_2383229 232.8278 0.8811189
ILMN_1806310 295.5452 0.4265734
ILMN_1779670 348.8543 0.1258741
ILMN_1717783 362.0908 0.08741259
ILMN_1814316 318.649 0.2692308
ILMN_2359168 298.2757 0.4125874
ILMN_1731507 215.0239 0.9440559
ILMN_1787689 305.9495 0.3356643
ILMN_3241953 536.0023 0
ILMN_1745607 302.2676 0.3741259
ILMN_2136495 298.1886 0.4160839
ILMN_1668111 204.9954 0.9615384
ILMN_2295559 227.8208 0.9020979
ILMN_1735045 322.5092 0.2412587
ILMN_1680754 175.4285 0.9965035
ILMN_2375184 256.3419 0.7692308
ILMN_1659452 371.4485 0.05594406
ILMN_1767388 247.4388 0.8286713

Total number of rows: 29377

Table truncated, full table size 843 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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