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Sample GSM856102 Query DataSets for GSM856102
Status Public on Jan 22, 2013
Title Semen 3
Sample type RNA
 
Source name Human semen
Organism Homo sapiens
Characteristics physiological specimen: Semen
ethnic group: Korean
gender: male
Extracted molecule total RNA
Extraction protocol RNA was extracted with QIAGEN RNeasy mini kit or QIAGEN RNeasy Protect Saliva mini kit (saliva) in accordance with the prescribed protocol provided with the kit. Quality control was performed with Experion (BIO-RAD).
Label biotin
Label protocol Illumina TotalPrep RNA Amplification kit (Ambion)
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 3
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Jan 04, 2012
Last update date Jan 22, 2013
Contact name Seon-Young Kim
E-mail(s) [email protected]
Phone 82-42-879-8116
Organization name Korea Research Institute of Bioscience and Biotechnology
Department Genome Research Center
Lab Human Genomics
Street address 52 Eoeun-dong, Yuseong-gu
City Daejon
ZIP/Postal code 305333
Country South Korea
 
Platform ID GPL14951
Series (1)
GSE34844 Genome-wide mRNA profiling for identification of specific body fluid markers

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 293.978 0.5451264
ILMN_2055271 251.8896 0.7833935
ILMN_2383229 296.9719 0.5234657
ILMN_1806310 280.1835 0.6245487
ILMN_1779670 357.2707 0.1805054
ILMN_1717783 289.7403 0.5631769
ILMN_1814316 318.7461 0.3682311
ILMN_2359168 303.4357 0.4729242
ILMN_1731507 264.1608 0.7039711
ILMN_1787689 391.5356 0.101083
ILMN_3241953 344.0105 0.2382672
ILMN_1745607 337.7513 0.2635379
ILMN_2136495 326.9367 0.3068592
ILMN_1668111 338.9561 0.2563177
ILMN_2295559 262.3868 0.7148014
ILMN_1735045 476.2395 0.007220217
ILMN_1680754 200.8365 0.9783394
ILMN_2375184 238.3751 0.8628159
ILMN_1659452 344.6412 0.234657
ILMN_1767388 438.1484 0.03610108

Total number of rows: 29377

Table truncated, full table size 866 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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