 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Dec 01, 2005 |
| Title |
Cell culture treatment study |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by array
|
| Summary |
Profiling the transcriptome of Arabidopsis suspension cells in response to a range of abiotic treatments.
Keywords: treatment response
|
| |
|
| Overall design |
variable_1 = 3 h
variable_2 = 12 h
variable_3 = untreated, control
variable_4 = hydrogen peroxide
variable_5 = N2 air replacement
variable_6 = chitin
variable_7 = cold
variable_8 = cysteine
variable_9 = flagellen
variable_10 = mannitol
variable_11 = norflurazon
variable_12 = oligomycin 0.125 uM
variable_13 = oligomycin 1.25 uM
variable_14 = roteonone
variable_15 = salicylic acid 10 uM
variable_16 = salicylic acid 100 uM
variable_17 = chloramphenicol
|
| |
|
| Contributor(s) |
Clifton R, Lister R, Sappl P, Parker K, Whelan J, Millar AH, Singh K |
| Citation(s) |
14730085, 16027974 |
| |
| Submission date |
Dec 01, 2005 |
| Last update date |
Jun 12, 2017 |
| Contact name |
Rachel Clifton |
| E-mail(s) |
[email protected]
|
| Organization name |
Plant Energy Biology, ARC Centre of Excellence
|
| Department |
Biochemistry, UWA
|
| Lab |
Plant Molecular Biology Group
|
| Street address |
4th Floor CMS Building M310, University of Western Australia
|
| City |
Crawley |
| State/province |
Western Australia |
| ZIP/Postal code |
6009 |
| Country |
Australia |
| |
|
| Platforms (1) |
| GPL198 |
[ATH1-121501] Affymetrix Arabidopsis ATH1 Genome Array |
|
| Samples (37)
|
| GSM85626 |
hydrogen peroxide treated, 3 h, replicate 1 |
| GSM85627 |
hydrogen peroxide treated, 3 h, replicate 2 |
| GSM85628 |
mannitol treated, 3 h, replicate 1 |
| GSM85629 |
0.125 uM oligomycin treated, 3 h, replicate 1 |
| GSM85630 |
0.125 uM oligomycin treated, 3 h, replicate 2 |
| GSM85631 |
1.25 uM oligomycin treated, 3 h, replicate 1 |
| GSM85632 |
1.25 uM oligomycin treated, 3 h, replicate 2 |
| GSM85633 |
chitin treated, 3 h, replicate 1 |
| GSM85634 |
chitin treated, 3 h, replicate 2 |
| GSM85635 |
chloramphenicol treated, 3 h, replicate 1 |
| GSM85636 |
chloramphenicol treated, 3 h, replicate 2 |
| GSM85637 |
cold treated, 3 h, replicate 1 |
| GSM85638 |
cold treated, 3 h, replicate 2 |
| GSM85639 |
untreated 3 h replicate 1 |
| GSM85640 |
untreated 3 h replicate 2 |
| GSM85641 |
untreated 3 h replicate 3 |
| GSM85642 |
untreated 3 h replicate 4 |
| GSM85643 |
flagellen treated, 3 h, replicate 1 |
| GSM85644 |
flagellen treated, 3 h, replicate 2 |
| GSM85645 |
treated with N2 to replace air, 3 h, replicate 1 |
| GSM85646 |
treated with N2 gas to replace air, 3 h, replicate 2 |
| GSM85647 |
rotenone treated, 3 h, replicate 1 |
| GSM85648 |
rotenone treated, 3 h, replicate 2 |
| GSM85649 |
10 uM salicylic acid treated, 3 h, replicate 1 |
| GSM85650 |
10 uM salicylic acid treated, 3 h, replicate 2 |
| GSM85651 |
100 uM salicylic acid treated, 3 h, replicate 1 |
| GSM85652 |
100 uM salicylic acid treated, 3 h, replicate 2 |
| GSM85653 |
untreated 12 h replicate 1 |
| GSM85654 |
untreated 12 h replicate 2 |
| GSM85655 |
rotenone treated, 12 h, replicate 1 |
| GSM85656 |
rotenone treated, 12 h, replicate 2 |
| GSM85657 |
norflurazon treated, 12 h, replicate 1 |
| GSM85658 |
norflurazon treated, 12 h, replicate 2 |
| GSM85659 |
chloramphenicol treated, 12 h, replicate 1 |
| GSM85660 |
chloramphenicol treated, 12 h, replicate 2 |
| GSM85661 |
cysteine treated, 12 h, replicate 1 |
| GSM85662 |
cysteine treated, 12 h, replicate 2 |
|
| Relations |
| BioProject |
PRJNA93863 |
| Supplementary data files not provided |
|
|
|
|
 |
Less...
More...