|
| Status |
Public on May 03, 2019 |
| Title |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Expression profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
31992186 |
| |
| Submission date |
May 02, 2019 |
| Last update date |
Jan 30, 2020 |
| Contact name |
Carlos Martinez-Perez |
| E-mail(s) |
[email protected]
|
| Organization name |
The University of Edinburgh
|
| Department |
Institute of Genetics and Molecular Medicine
|
| Street address |
Western General Hospital, Crewe Road South
|
| City |
Edinburgh |
| ZIP/Postal code |
EH4 2XU |
| Country |
United Kingdom |
| |
|
| Platforms (7)
|
| GPL96 |
[HG-U133A] Affymetrix Human Genome U133A Array |
| GPL10558 |
Illumina HumanHT-12 V4.0 expression beadchip |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL17303 |
Ion Torrent Proton (Homo sapiens) |
| GPL21697 |
NextSeq 550 (Homo sapiens) |
| GPL23159 |
[Clariom_S_Human] Affymetrix Clariom S Assay, Human (Includes Pico Assay) |
| GPL26593 |
NanoString nCounter Human gene expression custom codeset |
|
| Samples (121)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE130458 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [Affy_ClariomS] |
| GSE130459 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [Affy_U133A] |
| GSE130460 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [Illumina] |
| GSE130462 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [Nanostring] |
| GSE130469 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [Lexogen_QuantSeq] |
| GSE130643 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [BioSpyder_TempoSeq] |
| GSE130644 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [QiaSeq] |
| GSE130660 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [RNA-Seq] |
| GSE130762 |
Unlocking the transcriptomic potential of formalin-fixed paraffin embedded clinical tissues: Comparison of gene expression profiling approaches [AmpliSeq] |
|
| Relations |
| BioProject |
PRJNA540858 |
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