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    Nuclear transport factor 2 (NTF2) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820081, updated on 18-Sep-2024

    Summary

    Official Full Name
    Nuclear transport factor 2 (NTF2) family protein
    Primary source
    TAIR:AT3G09250
    Locus tag
    AT3G09250
    See related
    Araport:AT3G09250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (2838943..2840614)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene laccase 7 Neighboring gene myb domain protein 1 Neighboring gene kinase with tetratricopeptide repeat domain-containing protein Neighboring gene ncRNA Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene ncRNA Neighboring gene glutathione S-transferase TAU 8

    Interactions

    General gene information

    NM_001202916.1
    NM_001337810.1

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast PubMed 
    located_in nucleus  

    General protein information

    Preferred Names
    Nuclear transport factor 2 (NTF2) family protein
    NP_001189845.1
    • Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3).
    NP_566347.1
    • Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3); Has 282 Blast hits to 282 proteins in 97 species: Archae - 0; Bacteria - 155; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2838943..2840614
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111759.4 → NP_566347.1  Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566347.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FAP8, Q9SR38
      Conserved Domains (2) summary
      pfam02151
      Location:88 → 118
      UVR; UvrB/uvrC motif
      pfam13474
      Location:124 → 241
      SnoaL_3; SnoaL-like domain
    2. NM_001202916.1 → NP_001189845.1  Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189845.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IZV9
      Conserved Domains (2) summary
      pfam02151
      Location:74 → 105
      UVR; UvrB/uvrC motif
      pfam13474
      Location:110 → 218
      SnoaL_3; SnoaL-like domain
    3. NM_001337810.1 → NP_001327225.1  Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VFU5, A0A1I9LRN3, A0A384KB92
      Conserved Domains (2) summary
      pfam02151
      Location:74 → 104
      UVR; UvrB/uvrC motif
      pfam13474
      Location:110 → 227
      SnoaL_3; SnoaL-like domain
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