U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Nuclear transport factor 2 (NTF2) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820081, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Nuclear transport factor 2 (NTF2) family protein
Primary source
TAIR:AT3G09250
Locus tag
AT3G09250
See related
Araport:AT3G09250
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (2838943..2840614)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene laccase 7 Neighboring gene myb domain protein 1 Neighboring gene kinase with tetratricopeptide repeat domain-containing protein Neighboring gene ncRNA Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene ncRNA Neighboring gene glutathione S-transferase TAU 8

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_001202916.1
NM_001337810.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Nuclear transport factor 2 (NTF2) family protein
NP_001189845.1
  • Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3).
NP_566347.1
  • Nuclear transport factor 2 (NTF2) family protein; FUNCTIONS IN: DNA binding, nuclease activity; INVOLVED IN: nucleotide-excision repair; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UvrB/UvrC protein (InterPro:IPR001943); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3); Has 282 Blast hits to 282 proteins in 97 species: Archae - 0; Bacteria - 155; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2838943..2840614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111759.4 → NP_566347.1  Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566347.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FAP8, Q9SR38
    Conserved Domains (2) summary
    pfam02151
    Location:88 → 118
    UVR; UvrB/uvrC motif
    pfam13474
    Location:124 → 241
    SnoaL_3; SnoaL-like domain

  2. NM_001202916.1 → NP_001189845.1  Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189845.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IZV9
    Conserved Domains (2) summary
    pfam02151
    Location:74 → 105
    UVR; UvrB/uvrC motif
    pfam13474
    Location:110 → 218
    SnoaL_3; SnoaL-like domain

  3. NM_001337810.1 → NP_001327225.1  Nuclear transport factor 2 (NTF2) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VFU5, A0A1I9LRN3, A0A384KB92
    Conserved Domains (2) summary
    pfam02151
    Location:74 → 104
    UVR; UvrB/uvrC motif
    pfam13474
    Location:110 → 227
    SnoaL_3; SnoaL-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.