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Accession: PRJEB52999 ID: 883888

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Spring phytoplankton bloom at Helgoland in the year 2020

Metagenomic sequencing of surface seawater samples collected during the spring phytoplankton bloom at Helgoland in the year 2020. More...
AccessionPRJEB52999
Data TypeGenome sequencing and assembly
ScopeMonoisolate
PublicationsSidhu C et al., "Dissolved storage glycans shaped the community composition of abundant bacterioplankton clades during a North Sea spring phytoplankton bloom.", Microbiome, 2023 Apr 17;11(1):77
SubmissionRegistration date: 24-Sep-2022
Max Planck Institute for Marine Microbiology
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)3012
WGS master817
Genomic DNA21
SRA Experiments64
Publications
PubMed1
PMC1
Other datasets
BioSample902
Assembly838
Assembly details:
Assembly levelNumber of Assemblies
19
2
71
746
838
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_943787325.1ContigCALSLZ000000000
SAMEA110055843
GCA_943844765.1ContigCALTLB000000000
SAMEA110069269
GCA_943787505.1ContigCALSMR000000000
SAMEA110055829
GCA_943788435.1ContigCALSQG000000000
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GCA_943845785.1ContigCALTOZ000000000
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GCA_943841595.1ContigCALSYZ000000000
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GCA_943842805.1ContigCALTCV000000000
SAMEA110068999
GCA_943787815.1ContigCALSNW000000000
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GCA_943843335.1ScaffoldCALTFP000000000
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GCA_943843255.1ContigCALTFI000000000
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GCA_943841335.1ContigCALSYA000000000
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GCA_943840595.1ContigCALSVP000000000
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GCA_943840995.1ContigCALSWE000000000
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GCA_943840815.1ContigCALSVS000000000
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GCA_943842585.1ContigCALTBX000000000
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GCA_943844695.1ContigCALTKU000000000
SAMEA110069222
GCA_943788295.1ContigCALSPS000000000
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GCA_943789275.1ContigCALSTM000000000
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GCA_943788655.1ContigCALSRB000000000
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GCA_943843275.1ContigCALTFE000000000
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GCA_943842395.1ContigCALTBU000000000
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GCA_943840915.1ContigCALSWH000000000
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GCA_943845165.1ContigCALTMP000000000
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GCA_943840775.1ContigCALSVL000000000
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GCA_943845645.1ContigCALTOL000000000
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GCA_943841375.1ScaffoldCALSXW000000000
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GCA_943841385.1ContigCALSYD000000000
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GCA_943788635.1ContigCALSRA000000000
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GCA_943842095.1ContigCALTCP000000000
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GCA_943846185.1ContigCALTQY000000000
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GCA_943787175.1ContigCALSLK000000000
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GCA_943843015.1ContigCALTEI000000000
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GCA_943788605.1ContigCALSQX000000000
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GCA_943843395.1ContigCALTFY000000000
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GCA_943787745.1ScaffoldCALSNJ000000000
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GCA_943840725.1ContigCALSWP000000000
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GCA_943840755.1ScaffoldCALSVE000000000
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GCA_943841935.1ContigCALTAE000000000
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GCA_943843085.1ContigCALTEP000000000
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GCA_943845735.1ContigCALTOV000000000
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GCA_943789385.1ScaffoldCALSTW000000000
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GCA_943841975.1ContigCALTAO000000000
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GCA_943846615.1Complete genomeSAMEA110055920
GCA_943846765.1Complete genomeSAMEA110055850
GCA_943843795.1ContigCALTHM000000000
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GCA_943846095.1ContigCALTQG000000000
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GCA_943845125.1ContigCALTML000000000
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GCA_943843475.1ContigCALTGC000000000
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GCA_943842335.1ContigCALTAR000000000
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GCA_943787185.1ContigCALSLL000000000
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GCA_943845615.1ContigCALTOJ000000000
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GCA_943841125.1ContigCALSXJ000000000
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GCA_943845385.1ContigCALTNL000000000
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GCA_943841965.1ContigCALTCR000000000
SAMEA110069048
GCA_943845045.1ContigCALTMB000000000
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GCA_943842635.1ContigCALTDJ000000000
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GCA_943845855.1ContigCALTPG000000000
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GCA_943788195.1ContigCALSPH000000000
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GCA_943845275.1ContigCALTNA000000000
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GCA_943787805.1ContigCALSNV000000000
SAMEA110056063
GCA_943846215.1ContigCALTQO000000000
SAMEA110069419
GCA_943843765.1ContigCALTHR000000000
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GCA_943844455.1ContigCALTJQ000000000
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GCA_943843685.1ContigCALTGX000000000
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SAMEA110069055
GCA_943841575.1ContigCALSYU000000000
SAMEA110068857
GCA_943846675.1Complete genomeSAMEA110055908
GCA_943787905.1ContigCALSOF000000000
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GCA_943843345.1ContigCALTFQ000000000
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GCA_943843885.1ContigCALTHC000000000
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GCA_943845085.1ContigCALTMF000000000
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GCA_943788395.1ContigCALSQC000000000
SAMEA110056042
GCA_943788075.1ContigCALSOW000000000
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GCA_943840605.1ContigCALSUZ000000000
SAMEA110068973
GCA_943841085.1ContigCALSWN000000000
SAMEA110068891
GCA_943841645.1ContigCALSZB000000000
SAMEA110068895
GCA_943843905.1ContigCALTHL000000000
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GCA_943846135.1ScaffoldCALTQN000000000
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GCA_943843375.1ContigCALTFS000000000
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GCA_943845065.1ContigCALTMH000000000
SAMEA110069356
GCA_943843815.1ContigCALTHE000000000
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GCA_943841025.1ContigCALSXC000000000
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GCA_943844685.1ContigCALTKT000000000
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GCA_943846375.1ScaffoldCALTRH000000000
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GCA_943841485.1ContigCALSYM000000000
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GCA_943843825.1ContigCALTHW000000000
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GCA_943844645.1ContigCALTKP000000000
SAMEA110069248
GCA_943843845.1ContigCALTIA000000000
SAMEA110069218
GCA_943846255.1ScaffoldCALTQQ000000000
SAMEA110069423
GCA_943788215.1ContigCALSPK000000000
SAMEA110055884
GCA_943844905.1ContigCALTLP000000000
SAMEA110069308
GCA_943845775.1ContigCALTOY000000000
SAMEA110069370
GCA_943787685.1ContigCALSNI000000000
SAMEA110056064
GCA_943788045.1ScaffoldCALSOT000000000
SAMEA110055916
GCA_943842145.1ContigCALTAM000000000
SAMEA110069153
GCA_943844575.1ContigCALTKG000000000
SAMEA110069241
GCA_943842045.1ContigCALTAQ000000000
SAMEA110069034
GCA_943844175.1ContigCALTIF000000000
SAMEA110069197
GCA_943844315.1ScaffoldCALTIO000000000
SAMEA110069306
GCA_943845765.1ContigCALTOX000000000
SAMEA110069348
GCA_943846335.1ContigCALTRD000000000
SAMEA110069405
GCA_943844405.1ContigCALTIP000000000
SAMEA110069298
GCA_943843295.1ContigCALTFJ000000000
SAMEA110069105
GCA_943843835.1ContigCALTHF000000000
SAMEA110069214
GCA_943846385.1ScaffoldCALTRI000000000
SAMEA110069441
GCA_943844935.1ScaffoldCALTLR000000000
SAMEA110069307
GCA_943788865.1ContigCALSRX000000000
SAMEA110056030
GCA_943845225.1ContigCALTMU000000000
SAMEA110069334
GCA_943846585.1Complete genomeSAMEA110056052
GCA_943846595.1Complete genomeSAMEA110056037
GCA_943788885.1ContigCALSRY000000000
SAMEA110056029
GCA_943844075.1ContigCALTIU000000000
SAMEA110069193
GCA_943842135.1ContigCALTBC000000000
SAMEA110069054
GCA_943844235.1ContigCALTHU000000000
SAMEA110069292
GCA_943842175.1ContigCALTBY000000000
SAMEA110069035
GCA_943841565.1ContigCALSYT000000000
SAMEA110068947
GCA_943787775.1ContigCALSNS000000000
SAMEA110056031
GCA_943844785.1ContigCALTLD000000000
SAMEA110069272
GCA_943841165.1ContigCALSXO000000000
SAMEA110068919
GCA_943843385.1ContigCALTFT000000000
SAMEA110069125
GCA_943843585.1ContigCALTGM000000000
SAMEA110069100
GCA_943846655.1Complete genomeSAMEA110056025
GCA_943787245.1ContigCALSLR000000000
SAMEA110055862
GCA_943846605.1ChromosomeSAMEA110056005
GCA_943846685.1Complete genomeSAMEA110055883
GCA_943788835.1ContigCALSRU000000000
SAMEA110056009
GCA_943840955.1ContigCALSWX000000000
SAMEA110068858
GCA_943787855.1ContigCALSOA000000000
SAMEA110055871
GCA_943842595.1ScaffoldCALTCJ000000000
SAMEA110069003
GCA_943788825.1ContigCALSRT000000000
SAMEA110056007
GCA_943788895.1ContigCALSRZ000000000
SAMEA110056050
GCA_943845285.1ContigCALTNB000000000
SAMEA110069355
GCA_943840845.1ContigCALSVW000000000
SAMEA110068941
GCA_943844525.1ContigCALTKF000000000
SAMEA110069245
GCA_943844715.1ContigCALTKV000000000
SAMEA110069225
GCA_943841735.1ContigCALSZE000000000
SAMEA110068879
GCA_943846145.1ContigCALTQL000000000
SAMEA110069409
GCA_943789335.1ContigCALSTS000000000
SAMEA110056061
GCA_943789435.1ContigCALSUD000000000
SAMEA110056044
GCA_943841015.1ContigCALSXG000000000
SAMEA110068890
GCA_943788715.1ContigCALSRI000000000
SAMEA110055923
GCA_943788325.1ContigCALSPV000000000
SAMEA110055963
GCA_943841225.1ContigCALSWY000000000
SAMEA110068901
GCA_943843985.1ContigCALTJK000000000
SAMEA110069187
GCA_943841555.1ContigCALSYS000000000
SAMEA110068946
GCA_943842675.1ContigCALTDL000000000
SAMEA110069061
GCA_943844955.1ContigCALTLU000000000
SAMEA110069322
GCA_943789145.1ContigCALSSZ000000000
SAMEA110055944
GCA_943845685.1ContigCALTOP000000000
SAMEA110069329
GCA_943789235.1ContigCALSTI000000000
SAMEA110055873
GCA_943845435.1ContigCALTNS000000000
SAMEA110069233
GCA_943842005.1ContigCALTAT000000000
SAMEA110069049
GCA_943787425.1ContigCALSMJ000000000
SAMEA110055859
GCA_943789055.1ScaffoldCALSSR000000000
SAMEA110055868
GCA_943841685.1ContigCALSZK000000000
SAMEA110068871
GCA_943787895.1ContigCALSOE000000000
SAMEA110056036
GCA_943843465.1ContigCALTGB000000000
SAMEA110069072
GCA_943845835.1ContigCALTPF000000000
SAMEA110069391
GCA_943787705.1ContigCALSNL000000000
SAMEA110055932
GCA_943842925.1ScaffoldCALTDX000000000
SAMEA110069119
GCA_943846415.1ContigCALTRK000000000
SAMEA110069052
GCA_943845925.1ContigCALTPP000000000
SAMEA110069450
GCA_943845175.1ContigCALTMQ000000000
SAMEA110069393
GCA_943789495.1ContigCALSUI000000000
SAMEA110055943
GCA_943840895.1ContigCALSXI000000000
SAMEA110068905
GCA_943841475.1ContigCALSYI000000000
SAMEA110068982
GCA_943845625.1ContigCALTOI000000000
SAMEA110069289
GCA_943841445.1ContigCALSYK000000000
SAMEA110068979
GCA_943787645.1ContigCALSNH000000000
SAMEA110055892
GCA_943845365.1ContigCALTNI000000000
SAMEA110069389
GCA_943844105.1ContigCALTIK000000000
SAMEA110069190
GCA_943842065.1ContigCALTBQ000000000
SAMEA110069101
GCA_943787835.1ScaffoldCALSNY000000000
SAMEA110056051
GCA_943788445.1ContigCALSQH000000000
SAMEA110056014
GCA_943846295.1ContigCALTQW000000000
SAMEA110069407
GCA_943846285.1ContigCALTQS000000000
SAMEA110069425
GCA_943787595.1ContigCALSNA000000000
SAMEA110055864
GCA_943788965.1ContigCALSSH000000000
SAMEA110055869
GCA_943841295.1ContigCALSXH000000000
SAMEA110068950
GCA_943789485.1ContigCALSUH000000000
SAMEA110055948
GCA_943842605.1ContigCALTDG000000000
SAMEA110069022
GCA_943844325.1ContigCALTKE000000000
SAMEA110069201
GCA_943845025.1ContigCALTMC000000000
SAMEA110069354
GCA_943789415.1ContigCALSUA000000000
SAMEA110055902
GCA_943788875.1ScaffoldCALSSA000000000
SAMEA110056022
GCA_943843205.1ContigCALTFC000000000
SAMEA110069068
GCA_943843695.1ContigCALTGY000000000
SAMEA110069152
GCA_943842965.1ContigCALTED000000000
SAMEA110069151
GCA_943842505.1ContigCALTDI000000000
SAMEA110069136
GCA_943845675.1ContigCALTOO000000000
SAMEA110069316
GCA_943787675.1ContigCALSNK000000000
SAMEA110055931
GCA_943788225.1ContigCALSPL000000000
SAMEA110055957
GCA_943788205.1ContigCALSPJ000000000
SAMEA110055958
GCA_943788795.1ContigCALSRQ000000000
SAMEA110055968
GCA_943789195.1ContigCALSTE000000000
SAMEA110055937
GCA_943843365.1ScaffoldCALTFR000000000
SAMEA110069157
GCA_943844965.1ContigCALTLV000000000
SAMEA110069320
GCA_943846705.1Complete genomeSAMEA110055893
GCA_943844945.1ContigCALTLT000000000
SAMEA110069318
GCA_943787415.1ContigCALSMI000000000
SAMEA110055848
GCA_943844465.1ContigCALTKD000000000
SAMEA110069268
GCA_943842735.1ContigCALTCU000000000
SAMEA110069111
GCA_943845015.1ContigCALTMA000000000
SAMEA110069335
GCA_943845595.1ContigCALTOG000000000
SAMEA110069285
GCA_943845915.1ContigCALTPL000000000
SAMEA110069429
GCA_943841545.1ContigCALSYR000000000
SAMEA110068945
GCA_943787985.1ContigCALSOO000000000
SAMEA110055878
GCA_943844375.1ContigCALTJJ000000000
SAMEA110069350
GCA_943841895.1ContigCALTAA000000000
SAMEA110068995
GCA_943841275.1ContigCALSXU000000000
SAMEA110068864
GCA_943788135.1ContigCALSPC000000000
SAMEA110055954
GCA_943787785.1ScaffoldCALSNT000000000
SAMEA110055984
GCA_943787605.1ContigCALSNB000000000
SAMEA110055837
GCA_943789255.1ContigCALSTJ000000000
SAMEA110055952
GCA_943787335.1ContigCALSMA000000000
SAMEA110055844
GCA_943844395.1ContigCALTJW000000000
SAMEA110069255
GCA_943841915.1ContigCALTAD000000000
SAMEA110068913
GCA_943842075.1ContigCALTDN000000000
SAMEA110069045
GCA_943842285.1ContigCALTCH000000000
SAMEA110069044
GCA_943787825.1ScaffoldCALSNX000000000
SAMEA110056017
GCA_943844045.1ContigCALTJA000000000
SAMEA110069315
GCA_943789125.1ContigCALSSX000000000
SAMEA110055949
GCA_943845145.1ScaffoldCALTMN000000000
SAMEA110069387
GCA_943844515.1ContigCALTKH000000000
SAMEA110069243
GCA_943788345.1ContigCALSPX000000000
SAMEA110055877
GCA_943787205.1ContigCALSLN000000000
SAMEA110055832
GCA_943788565.1ContigCALSQS000000000
SAMEA110056043
GCA_943787875.1ContigCALSOD000000000
SAMEA110056003
GCA_943787555.1ContigCALSMW000000000
SAMEA110055841
GCA_943843675.1ContigCALTGW000000000
SAMEA110069155
GCA_943841665.1ContigCALSZJ000000000
SAMEA110068873
GCA_943843245.1ContigCALTFF000000000
SAMEA110069078
GCA_943845745.1ContigCALTOW000000000
SAMEA110069358
GCA_943845975.1ContigCALTQH000000000
SAMEA110069442
GCA_943843895.1ContigCALTHK000000000
SAMEA110069264
GCA_943846625.1ChromosomeSAMEA110056026
GCA_943788515.1ContigCALSQM000000000
SAMEA110056008
GCA_943841065.1ContigCALSWQ000000000
SAMEA110068958
GCA_943840645.1ContigCALSUX000000000
SAMEA110068964
GCA_943841615.1ContigCALSYV000000000
SAMEA110068942
GCA_943787565.1ScaffoldCALSMX000000000
SAMEA110055866
GCA_943841835.1ContigCALSZW000000000
SAMEA110068927
GCA_943846205.1ContigCALTQJ000000000
SAMEA110069411
GCA_943841175.1ContigCALSWL000000000
SAMEA110068948
GCA_943842345.1ContigCALTAS000000000
SAMEA110069134
GCA_943787965.1ContigCALSOL000000000
SAMEA110055900
GCA_943842455.1ScaffoldCALTBE000000000
SAMEA110069168
GCA_943789005.1ContigCALSSL000000000
SAMEA110056049
GCA_943842525.1ContigCALTCG000000000
SAMEA110069013
GCA_943787615.1ContigCALSNC000000000
SAMEA110055828
GCA_943845885.1ContigCALTPJ000000000
SAMEA110069247
GCA_943788365.1ContigCALSPZ000000000
SAMEA110055965
GCA_943842215.1ContigCALTAU000000000
SAMEA110069084
GCA_943843935.1ContigCALTHI000000000
SAMEA110069226
GCA_943845245.1ContigCALTMV000000000
SAMEA110069325
GCA_943846785.1Complete genomeSAMEA110055826
GCA_943845095.1ContigCALTMI000000000
SAMEA110069363
GCA_943788055.1ContigCALSOU000000000
SAMEA110056020
GCA_943788385.1ContigCALSQB000000000
SAMEA110056013
GCA_943845135.1ContigCALTMO000000000
SAMEA110069382
GCA_943845105.1ContigCALTMK000000000
SAMEA110069374
GCA_943846325.1ContigCALTQX000000000
SAMEA110069402
GCA_943844275.1ContigCALTJS000000000
SAMEA110069186
GCA_943841345.1ContigCALSXT000000000
SAMEA110068952
GCA_943787975.1ContigCALSOM000000000
SAMEA110056067
GCA_943788355.1ContigCALSPY000000000
SAMEA110055961
GCA_943844425.1ContigCALTJH000000000
SAMEA110069302
GCA_943844555.1ContigCALTJR000000000
SAMEA110069286
GCA_943844755.1ContigCALTKY000000000
SAMEA110069254
GCA_943845995.1ContigCALTQD000000000
SAMEA110069443
GCA_943841325.1ContigCALSYB000000000
SAMEA110068862
GCA_943846085.1ScaffoldCALTPS000000000
SAMEA110069417
GCA_943789015.1ContigCALSSM000000000
SAMEA110056066
GCA_943843865.1ContigCALTHO000000000
SAMEA110069213
GCA_943845725.1ContigCALTOT000000000
SAMEA110069339
GCA_943845875.1ContigCALTPI000000000
SAMEA110069296
GCA_943844355.1ContigCALTIS000000000
SAMEA110069304
GCA_943846235.1ScaffoldCALTQP000000000
SAMEA110069418
GCA_943789105.1ContigCALSSW000000000
SAMEA110055933
GCA_943843875.1ContigCALTHD000000000
SAMEA110069217
GCA_943844535.1ContigCALTKA000000000
SAMEA110069240
GCA_943788245.1ContigCALSPN000000000
SAMEA110055971
GCA_943841265.1ContigCALSXK000000000
SAMEA110068984
GCA_943845235.1ContigCALTMX000000000
SAMEA110069326
GCA_943844845.1ContigCALTLJ000000000
SAMEA110069279
GCA_943789025.1ContigCALSSN000000000
SAMEA110056055
GCA_943789315.1ContigCALSTQ000000000
SAMEA110055946
GCA_943788085.1ContigCALSOX000000000
SAMEA110055880
GCA_943787545.1ContigCALSMV000000000
SAMEA110055831
GCA_943845425.1ContigCALTNP000000000
SAMEA110069230
GCA_943787475.1ContigCALSMO000000000
SAMEA110055851
GCA_943846645.1Complete genomeSAMEA110056027
GCA_943846695.1Complete genomeSAMEA110068955
GCA_943846365.1ContigCALTRE000000000
SAMEA110069401
GCA_943841585.1ContigCALSYX000000000
SAMEA110068934
GCA_943842445.1ContigCALTBF000000000
SAMEA110069017
GCA_943842325.1ContigCALTAZ000000000
SAMEA110069010
GCA_943787795.1ContigCALSNU000000000
SAMEA110056018
GCA_943788505.1ContigCALSQR000000000
SAMEA110056038
GCA_943787455.1ContigCALSMM000000000
SAMEA110055833
GCA_943788675.1ContigCALSRE000000000
SAMEA110055977
GCA_943845075.1ContigCALTMG000000000
SAMEA110069362
GCA_943840575.1ContigCALSVF000000000
SAMEA110068925
GCA_943843545.1ContigCALTGG000000000
SAMEA110069079
GCA_943842975.1ContigCALTEE000000000
SAMEA110069164
GCA_943840735.1ContigCALSVB000000000
SAMEA110068936
GCA_943840875.1ContigCALSVU000000000
SAMEA110068932
GCA_943788175.1ContigCALSPG000000000
SAMEA110055915
GCA_943842655.1ContigCALTCZ000000000
SAMEA110069024
GCA_943841755.1ContigCALSZM000000000
SAMEA110068880
GCA_943788935.1ContigCALSSE000000000
SAMEA110056048
GCA_943841495.1ContigCALSYL000000000
SAMEA110068962
GCA_943840945.1ContigCALSVX000000000
SAMEA110068961
GCA_943841865.1ContigCALSZY000000000
SAMEA110068992
SRA Data Details
ParameterValue
Data volume, Gbases1,402
Data volume, Tbytes0.54

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