U.S. flag

An official website of the United States government

Vdup1 Vitamin D[[3]] up-regulated protein 1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 38023, updated on 9-Dec-2024

Summary

Official Symbol
Vdup1provided by FlyBase
Official Full Name
Vitamin D[[3]] up-regulated protein 1provided by FlyBase
Primary source
FLYBASE:FBgn0035103
Locus tag
Dmel_CG7047
See related
AllianceGenome:FB:FBgn0035103
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG7047; Dmel\CG7047; dvdup1; TXNIP; vdup1; VDUP1
Summary
Predicted to enable ubiquitin protein ligase binding activity. Involved in cell redox homeostasis and negative regulation of removal of superoxide radicals. Located in cytoplasm and nucleus. Is expressed in several structures, including adult fat body; epidermis; germline cell; glial cell; and gut section. Orthologous to human ARRDC1 (arrestin domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Vdup1 in Genome Data Viewer
Location:
61B2-61B2; 3-1 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (176306..178963, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (176306..178963, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene p130CAS Neighboring gene long non-coding RNA:CR43151 Neighboring gene antisense RNA:CR45806 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene MAP kinase-specific phosphatase Neighboring gene Mitochondrial carrier homolog 1

Genomic regions, transcripts, and products

Bibliography

Interactions

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables ubiquitin protein ligase binding  
Component Evidence Code Pubs
is_active_in cytoplasm  
located_in cytoplasm PubMed 
located_in nucleus PubMed 

General protein information

Preferred Names
vitamin D[[3]] up-regulated protein 1
Names
CG7047-PA
CG7047-PB
CG7047-PC
CG7047-PD
CG7047-PE
Vdup1-PA
Vdup1-PB
Vdup1-PC
Vdup1-PD
Vdup1-PE
vitamin D3 up-regulated protein 1
vitamin-D[[3]] upregulated protein 1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    176306..178963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001169832.2 → NP_001163303.1  vitamin D[[3]] up-regulated protein 1, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163303.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8K8, Q8SYE1
    Conserved Domains (2) summary
    smart01017
    Location:171 → 299
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:8 → 145
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
  2. NM_001274255.1 → NP_001261184.1  vitamin D[[3]] up-regulated protein 1, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001261184.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8K8, Q8SYE1
    Conserved Domains (2) summary
    smart01017
    Location:171 → 299
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:8 → 145
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
  3. NM_138160.4 → NP_612004.2  vitamin D[[3]] up-regulated protein 1, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_612004.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8K8, Q8SYE1
    Related
    FBpp0072433
    Conserved Domains (2) summary
    smart01017
    Location:171 → 299
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:8 → 145
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
  4. NM_167798.3 → NP_728479.1  vitamin D[[3]] up-regulated protein 1, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_728479.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8K8, Q8SYE1
    Related
    FBpp0072434
    Conserved Domains (2) summary
    smart01017
    Location:171 → 299
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:8 → 145
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
  5. NM_206221.3 → NP_995943.1  vitamin D[[3]] up-regulated protein 1, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_995943.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q0E8K8, Q8SYE1
    Conserved Domains (2) summary
    smart01017
    Location:171 → 299
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:8 → 145
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
External link. Please review our privacy policy.