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CG10341 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 35125, updated on 4-Jan-2025

Summary

Official Symbol
CG10341provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0032701
Locus tag
Dmel_CG10341
See related
AllianceGenome:FB:FBgn0032701
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG10341
Summary
Predicted to enable RNA binding activity. Predicted to be involved in box H/ACA snoRNP assembly and ribosome biogenesis. Predicted to be part of sno(s)RNA-containing ribonucleoprotein complex. Is expressed in several structures, including anterior endoderm anlage; dorsal pharyngeal muscle cell; embryonic anal pad; embryonic/larval midgut primordium; and gut section. Human ortholog(s) of this gene implicated in melanoma. Orthologous to human NAF1 (nuclear assembly factor 1 ribonucleoprotein). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See CG10341 in Genome Data Viewer
Location:
37A1-37A1; 2-54 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (18698714..18700645)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (18698714..18700645)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Jwa

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in box H/ACA snoRNP assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in box H/ACA snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 
involved_in ribosome biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in ribosome biogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of sno(s)RNA-containing ribonucleoprotein complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of sno(s)RNA-containing ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
part_of sno(s)RNA-containing ribonucleoprotein complex ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
uncharacterized protein
Names
CG10341-PA
CG10341-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    18698714..18700645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_136054.5NP_609898.1  uncharacterized protein Dmel_CG10341, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_609898.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q961H3, Q9VJ62
    Related
    FBpp0080647
    Conserved Domains (1) summary
    pfam04410
    Location:269403
    Gar1; Gar1/Naf1 RNA binding region
  2. NM_001103708.2NP_001097178.2  uncharacterized protein Dmel_CG10341, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001097178.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A023GQ99
    Conserved Domains (1) summary
    pfam04410
    Location:268402
    Gar1; Gar1/Naf1 RNA binding region