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GEO accession:
Series GSE59860
Query DataSets for GSE59860
Status
Public on Jan 20, 2015
Title
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation
Organism
Homo sapiens
Experiment type
Expression profiling by array
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
25576597
Submission date
Jul 29, 2014
Last update date
May 15, 2019
Contact name
Daniel Salomon
E-mail(s)
[email protected]
Organization name
The Scripps Research Institute
Department
Molecular & Experimental Medicine
Lab
Salomon
Street address
10550 N Torrey Pines Rd, MEM-241
City
La Jolla
State/province
CA
ZIP/Postal code
92037
Country
USA
Platforms (3)
GPL10999
Illumina Genome Analyzer IIx (Homo sapiens)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
GPL11532
[HuGene-1_1-st] Affymetrix Human Gene 1.1 ST Array [transcript (gene) version]
Samples (58)
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More...
GSM1416908
4922_CD4_Naive_0 [Affymetrix]
GSM1416909
5211_CD4_Naive_0 [Affymetrix]
GSM1416910
5220_CD4_Naive_0 [Affymetrix]
GSM1416911
5234_CD4_Naive_0 [Affymetrix]
GSM1416912
5134_CD4_Naive_0 [Affymetrix]
GSM1416913
5157_CD4_Naive_0 [Affymetrix]
GSM1416914
4922_CD4_Memory_0 [Affymetrix]
GSM1416915
5076_CD4_Memory_0 [Affymetrix]
GSM1416916
5134_CD4_Memory_0 [Affymetrix]
GSM1416917
5157_CD4_Memory_0 [Affymetrix]
GSM1416918
5211_CD4_Memory_0 [Affymetrix]
GSM1416919
5220_CD4_Memory_0 [Affymetrix]
GSM1416920
5234_CD4_Memory_0 [Affymetrix]
GSM1416921
5134_CD4_Naive_48 [Affymetrix]
GSM1416922
5157_CD4_Naive_48 [Affymetrix]
GSM1416923
5211_CD4_Naive_48 [Affymetrix]
GSM1416924
5234_CD4_Naive_48 [Affymetrix]
GSM1416925
5076_CD4_Memory_48 [Affymetrix]
GSM1416926
5134_CD4_Memory_48 [Affymetrix]
GSM1416927
5157_CD4_Memory_48 [Affymetrix]
GSM1416928
5211_CD4_Memory_48 [Affymetrix]
GSM1416929
5234_CD4_Memory_48 [Affymetrix]
GSM1447395
5053_CD4_Naive_0 [RNA-Seq]
GSM1447396
5053_CD4_Naive_48 [RNA-Seq]
GSM1447397
5053_CD4_Memory_0 [RNA-Seq]
GSM1447398
5053_CD4_Memory_48 [RNA-Seq]
GSM1447399
5009_CD4_Naive_0 [RNA-Seq]
GSM1447400
5134_CD4_Naive_0 [RNA-Seq]
GSM1447401
5009_CD4_Naive_48 [RNA-Seq]
GSM1447402
5134_CD4_Naive_48 [RNA-Seq]
GSM1447403
5009_CD4_Memory_0 [RNA-Seq]
GSM1447404
5134_CD4_Memory_0 [RNA-Seq]
GSM1447405
5009_CD4_Memory_48 [RNA-Seq]
GSM1447406
5134_CD4_Memory_48 [RNA-Seq]
GSM1448222
4922_CD4_Memory_0 [Bisulfite-Seq]
GSM1448223
5076_CD4_Memory_48 [Bisulfite-Seq]
GSM1448224
5134_CD4_Memory_0 [Bisulfite-Seq]
GSM1448225
5134_CD4_Memory_48 [Bisulfite-Seq]
GSM1448226
5211_CD4_Memory_0 [Bisulfite-Seq]
GSM1448227
5211_CD4_Memory_48 [Bisulfite-Seq]
GSM1448228
5220_CD4_Memory_0 [Bisulfite-Seq]
GSM1448229
5234_CD4_Memory_0 [Bisulfite-Seq]
GSM1448230
5234_CD4_Memory_48 [Bisulfite-Seq]
GSM1448231
5234_CD4_Naive_48 [Bisulfite-Seq]
GSM1448232
5234_CD4_Naive_0 [Bisulfite-Seq]
GSM1448233
5220_CD4_Naive_0 [Bisulfite-Seq]
GSM1448234
5211_CD4_Naive_48 [Bisulfite-Seq]
GSM1448235
5134_CD4_Naive_48 [Bisulfite-Seq]
GSM1448236
5134_CD4_Naive_0 [Bisulfite-Seq]
GSM1448237
4922_CD4_Naive_0 [Bisulfite-Seq]
GSM1448238
4922_CD8 [Bisulfite-Seq]
GSM1448239
5211_CD8 [Bisulfite-Seq]
GSM1448240
5220_CD8 [Bisulfite-Seq]
GSM1448241
5284_CD8 [Bisulfite-Seq]
GSM1448242
4922_CD19 [Bisulfite-Seq]
GSM1448243
5211_CD19 [Bisulfite-Seq]
GSM1448244
5220_CD19 [Bisulfite-Seq]
GSM1448245
5284_CD19 [Bisulfite-Seq]
This SuperSeries is composed of the following SubSeries:
GSE58684
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation [Affymetrix]
GSE59846
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation [RNA-Seq]
GSE59858
Defining CD4 T Cell Memory by the Epigenetic Landscape of CpG DNA Methylation [Bisulfite-Seq]
Relations
BioProject
PRJNA256914
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE59860_RAW.tar
120.8 Mb
(http)
(custom)
TAR (of CEL, TXT)
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