GSE18927 |
University of Washington Human Reference Epigenome Mapping Project |
GSE19465 |
BI Human Reference Epigenome Mapping Project: ChIP-Seq in human subject |
GSE24565 |
Small RNA-seq from ENCODE/Cold Spring Harbor Lab |
GSE25115 |
Interferon-alpha mediates the development of autoimmunity by direct tissue toxicity and through immune-cell recruitment mechanisms |
GSE25246 |
BI Human Reference Epigenome Mapping Project: Characterization of DNA methylation by RRBS |
GSE25247 |
BI Human Reference Epigenome Mapping Project: Characterization of DNA methylation by RRBS in human subject |
GSE25248 |
BI Human Reference Epigenome Mapping Project: Characterization of DNA methylation by RRBS in HUES lines |
GSE25674 |
Genomic Profiling of HMGN1 Reveals an Association with Chromatin at Regulatory Regions |
GSE25710 |
[E-MTAB-223] ChIP-seq for FOXA1, ER and CTCF in breast cancer cell lines |
GSE26085 |
BCL6 is required for the initiation and maintenance of chronic myeloid leukemia |
GSE26284 |
ENCODE Cold Spring Harbor Labs Long RNA-seq |
GSE26516 |
Genome-wide identification of micro-ribonucleic acids associated with human endometrial receptivity in natural and stimulated cycles by deep sequencing |
GSE26530 |
Digital gene expression profiling of primary acute lymphoblastic leukemia cells |
GSE26826 |
Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing |
GSE26878 |
Digital gene and expression profiling of primary acute lymphoblastic leukemia (ALL) cells |
GSE26967 |
Dynamic Distribution of Linker Histone H1.5 in Cellular Differentiation |
GSE26979 |
Human Linker Histone H1.5 |
GSE27526 |
ChIP-seq defined genome-wide map of TGFbeta/SMAD4 targets: implications with clinical outcome of ovarian cancer patients |
GSE27584 |
DNA Methylation by Reduced Representation Bisulfite Seq from ENCODE/HudsonAlpha |
GSE28115 |
CBX3 Regulates Efficient RNA Processing Genome Wide |
GSE28254 |
Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk |
GSE28332 |
The Demethylase JMJD2C/KDM4C Localizes to H3K4me3 Positive Transcription Start Sites |
GSE28859 |
A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins (CLIP) |
GSE28864 |
A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins (mRNA-seq) |
GSE28865 |
A quantitative analysis of CLIP methods for identifying binding sites of RNA-binding proteins |
GSE28866 |
Transcriptional profiling of lncRNAs and novel transcribed regions across a diverse panel of archived human cancers |
GSE28874 |
Genome-wide analysis of p300, H3K4me3, H3K4me1, H3K27me3 and H3K27ac in in vitro differentiated human neural crest cells (hNCC) |
GSE28876 |
Epigenomic profiling of enhancers identifies orphan nuclear receptors NR2F1 and NR2F2 as novel regulators of human neural crest |
GSE28884 |
MicroRNA sequence and expression analysis in breast tumors by deep sequencing |
GSE28911 |
Replication initiation sites in cancer cells |
GSE29006 |
mRNA-seq of Human Airway Epithelial Cells |
GSE29007 |
Human Large Airway Epithelial Cells from healthy never and current smoker and smokers with and without lung cancer |
GSE29022 |
Technical and biological variance structure in mRNA-Seq data |
GSE29069 |
Global DNA Hypomethylation Coupled to Repressive Chromatin Domain Formation and Gene Silencing in Breast Cancer |
GSE29118 |
Genome-wide location analysis in breast cancer cells (HCC1954) |
GSE29119 |
Gene expression analysis of breast cancer (HCC1954) and normal breast cells (HMEC) |
GSE29127 |
Genome-wide DNA methylation mapping in breast cancer cells (HCC1954) and normal breast cells (HMEC) |
GSE29130 |
Epigenetic profiling of hematopoietic stem cells and leukemia stem cells |
GSE29160 |
rRNA cleavage ensures translational cessation in the mature sperm |
GSE29173 |
MicroRNA sequence and expression analysis in breast tumors by deep sequencing [miRNA sequence data] |
GSE29282 |
A Hybrid Mechanism of Action for BCL6 in B Cells Defined by Formation of Functionally Distinct Complexes at Enhancers and Promoters |
GSE29611 |
Histone Modifications by ChIP-seq from ENCODE/Broad Institute |
GSE29968 |
RNA Sequencing Analysis Generates Comprehensive Transcriptomic Landscape and Identifies PTK6 as a Novel Tumor Suppressor Gene in Esophageal Squamous Cell Carcinoma |
GSE30026 |
CDX2 ChIP-seq |
GSE30198 |
Digital gene expression and global mapping of polyadenylation sites with PolyA-Seq |
GSE30253 |
Analysis of DNA methylation in a three-generation family reveals widespread genetic influence on epigenetic regulation |
GSE30267 |
Super Elongation Complex (SEC) and global genomic analyses in murine embryonic stem (ES) cells and in human cells in response to activation signals. |
GSE30268 |
Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC). |
GSE30352 |
The evolution of gene expression levels in mammalian organs |
GSE30407 |
The ets transcription factor ELF5 suppresses the estrogen sensitive phenotype and contributes to antiestrogen resistance in luminal breast cancer. |
GSE30475 |
Colorectal Cancer Cells |
GSE30558 |
Bisulphite-sequencing of chromatin immunoprecipitated DNA (BisChiP-seq) directly informs methylation status |
GSE30567 |
ENCODE Cold Spring Harbor Labs Long RNA-seq (hg19) |
GSE30786 |
Determination of transcript abundance before and after serum induction in human HCT-116 colon cancer cell line. |
GSE30811 |
SuperSAGE evidence for CD14++CD16+ monocytes as a third monocyte subset |
GSE30895 |
Effect of splicing on histone H3 K36 methylation |
GSE31037 |
Small RNA sequencing in normal and psoriatic skin |
GSE31051 |
Small RNAs in H9 embryonic stem cells |
GSE31129 |
Genome-wide mapping of ligand-dependent progesterone receptor chromatin interactions in human breast cell lines using PR ChIP-seq |
GSE31130 |
Non-overlapping progesterone receptor cistromes contribute to cell-specific transcriptional outcomes in breast cells |
GSE31170 |
Nuclear DICKKOPF-1 as a biomarker of chemoresistance and poor clinical outcome in colorectal cancer |
GSE31216 |
The ets transcription factor ELF5 suppresses the estrogen sensitive phenotype and contributes to antiestrogen resistance in luminal breast cancer. [human ChIP-Seq] |
GSE31278 |
CTCF promotes RNA pol II pausing and links DNA methylation to alternative splicing |
GSE31294 |
Effect of p53 knowkdown on genome-wide map of AR-DNA binding |
GSE31353 |
Methylation map of 8 neuroblastoma cell lines: NGS after MBD2-capture |
GSE31355 |
A genome wide methylation map of neuroblastoma cell lines |
GSE31477 |
ENCODE Transcription Factor Binding Sites by ChIP-seq from Stanford/Yale/USC/Harvard |
GSE31485 |
CTCF promotes RNA pol II pausing and links DNA methylation to alternative splicing [ChIP-Seq] |
GSE31486 |
CTCF promotes RNA pol II pausing and links DNA methylation to alternative splicing [RNA-Seq] |
GSE31558 |
Distinct p53 Genomic Binding Patterns in Normal and Cancer-derived Human Cells |
GSE31794 |
Factors influencing in vivo deposition of histone variants H3.1 and H3.3 |
GSE31838 |
Tumor-specific retargeting of an oncogenic transcription factor chimera results in dysregulation of chromatin and transcription |
GSE31939 |
VDR/RXR and TCF4/beta-Catenin Cistromes in Colonic Cells of Colorectal Tumor Origin: Impact on c-FOS and c-MYC Gene Expression |
GSE31999 |
RNA-sequencing of left and right atrial |
GSE32162 |
RIPSEQ DNMT1 HL60 |
GSE32168 |
RRBS (Reduced Representation Bisulfite Sequencing) of HL60 |
GSE32222 |
Differential oestrogen receptor binding is associated with clinical outcome in breast cancer |
GSE32260 |
Relationship between DNMT1-RNA interactions, DNA methylation and gene expression |
GSE32307 |
Transposon-based construction of strand-specific RNA-seq libraries |
GSE32340 |
Reorganization of the host epigenome by a viral oncogene |
GSE32399 |
Regions of Focal DNA Hypermethylation and Long-Range Hypomethylation in Colorectal Cancer Coincide with Nuclear Lamina-Associated Domains |
GSE32424 |
Identification of a Novel Angiogenesis and Tumor Suppressor Gene Rab25 in Esophageal Squamous Cell Carcinoma |
GSE32491 |
Autophagy driven by a master regulator of hematopoiesis |
GSE32509 |
Combinatorial patterning of chromatin regulators uncovered by genome-wide location analysis in human cells |
GSE32689 |
Comparison of the human oocyte to its sister polar body |
GSE32698 |
Genome-wide DNA methylation analysis reveals novel epigenetic changes in chronic lymphocytic leukemia |
GSE32874 |
Personal Omics Profiling Reveals Dynamic Molecular Phenotypes and Actionable Medical Risks |
GSE33007 |
Genome-wide map of HBO1 in cancer derived human cell line |
GSE33013 |
Combinatorial role of two paralogous splicing factors, hnRNP L and L-like, in multiple-exon regulation of CD45 alternative splicing |
GSE33029 |
Integrated analysis of omics profiles |
GSE33128 |
Regulation of Mediator-dependent transcriptional activation of Pol II(G) through TFII |
GSE33221 |
Conserved molecular interactions within MYST-ING acetyltransferase complexes that regulate cell proliferation |
GSE33230 |
Genome wide DNA methylation analysis of leukemia and reprogrammed leukemia cells (sequencing) |
GSE33231 |
Genome wide DNA methylation analysis of leukemia and reprogrammed leukemia cells |
GSE33281 |
Bromodomain-Containing-Protein 4 (BRD4) Regulates RNA Polymerase II Serine 2 Phosphorylation in Human CD4+ T Cells |
GSE33294 |
Transcriptome sequencing of human hepatocellular carcinoma |
GSE33584 |
High-resolution profiling and analysis of viral and host small RNAs during human cytomegalovirus infection |
GSE33600 |
RNA Subcellular Localization by Paired End diTag Sequencing from ENCODE/GIS |
GSE33632 |
Genome-wide analysis of histone eviction by FAIRE-Seq |
GSE33633 |
Epigenetic changes due to histone eviction induced by anthracycline doxorubicin and aclarubicin |
GSE33634 |
Topoisomerase II inhibitors and histone eviction |
GSE33664 |
Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation |
GSE33701 |
Increased sensitivity of next generation sequencing-based expression profiling after globin reduction in human blood RNA |
GSE33716 |
TCERG1 regulates alternative splicing of Bcl-x gene by modulating the rate of RNAPII transcription |
GSE33782 |
Transcriptome of normal,paracancerous and cancerous colon tissues based on RNA-seq method |
GSE33784 |
Genome-wide maps of chromatin state in Williams-Beuren (WBS), Williams-Beuren Region duplication (WBRdupS), Smith-Magenis (DGS), DiGeorge (DGS) lymphoblastoid cell lines |
GSE33816 |
RNA-seq analysis of K562 cells (K562-shX) with stable integration of a tet-inducible shRNA targeting a candidate (X) transcription factor from ENCODE/HudsonAlpha-MyersLab |
GSE33838 |
DUX4 activates germline genes, retroelements and immune-mediators: Implications for facioscapulohumeral dystrophy |
GSE33858 |
MicroRNA expression profiles in lung cancer tissues versus adjacent lung tissues using next-gen sequencing |
GSE33867 |
Structural variation-induced changes of chromatin architecture and gene expression |
GSE33887 |
Mediator Complex Regulates Alternative mRNA Processing via the Med23 Subunit |
GSE33912 |
Functional Identification of Critical Bmi1 target genes in Neural Progenitor and Malignant Glioma cells |
GSE33954 |
Assessing the clear cell Renal Cell Carcinoma (ccRCC) DNA-methylome by MethylCapSeq |
GSE34097 |
The SEC family of RNA Polymerase II elongation factors: gene target specificity and transcriptional output |
GSE34137 |
Multicolor miRNA fluorescence in situ hybridization for tumor differential diagnosis |
GSE34316 |
Genome-wide Detection of Genes Targeted by Aberrant Somatic Hypermutation in Lymphoma |
GSE34329 |
Modulation of NF-kB-Dependent Gene Transcription Using Programmable DNA Minor Groove Binders |
GSE34403 |
Bisulphite-sequencing of chromatin immunoprecipitated DNA directly informs methylation status of histone-modified DNA |
GSE34419 |
HOXC9-induced neuronal differentiation in human neuroblastoma BE(2)-C cells [ChIP-seq analysis] |
GSE34422 |
HOXC9-induced neuronal differentiation in human neuroblastoma BE(2)-C cells |
GSE34448 |
RNA Subcellular CAGE Localization from ENCODE/RIKEN |
GSE34725 |
Inhibition of the LSD1 (KDM1A) demethylase reactivates the all-trans-retinoic acid differentiation pathway in acute myeloid leukemia [ChIP-Seq] |
GSE34726 |
Inhibition of the LSD1 (KDM1A) demethylase reactivates the all-trans-retinoic acid differentiation pathway in acute myeloid leukemia |
GSE34736 |
Molecular Effects of Doxycycline Treatment on Pterygium as Revealed by Massive Transcriptome Sequencing |
GSE34774 |
PCGF Homologs and RYBP Define Functionally Distinct PRC1 Family Complexes |
GSE34780 |
Chromatin Accessibility Reveals Insight into Androgen Receptor Activation and Transcriptional Specificity |
GSE34785 |
Genome-wide assay of Vezf1 and RNA Polymerase II binding |
GSE34791 |
"Calling Cards" for DNA-binding proteins in mammalian cells |
GSE34797 |
[E-MTAB-684] GENCODE PCR-Seq Batch IV |
GSE34820 |
[E-MTAB-737] GENCODE PCR-Seq Batch V |
GSE34891 |
Sequencing of small RNAs in healthy human serum from China |
GSE34941 |
Integrative Epigenomic Analysis Identifies Biomarkers and Therapeutic Targets in Adult B-Acute Lymphoblastic Leukemia |
GSE35109 |
Genome-Wide Mapping Of Time-Series ChIP-Seq Data For Human ERα Breast Cancer Cell Line (MCF-7) |
GSE35178 |
Transcriptome of normal, paracancerouse and cancerous bladder tissues based on RNA-Seq method |
GSE35268 |
Analysis of global gene expression profiles of hPAF1 deficient A549 cells |
GSE35375 |
Epigenetic modifications and chromosome conformations of the beta globin locus throughout development |
GSE35394 |
Rescue Of Dysfunctional Autophagy By Peptide IDR-1018 Attenuates Hyperinflammatory Phenotype Of Cystic Fibrosis Cells (RNA-seq) |
GSE35405 |
Sequence and expression analysis of human chromosome 20 gaps |
GSE35531 |
Small RNA profiles through the cell cycle in HeLa [small RNA-seq] |
GSE35533 |
Analysis of small RNA through the cell cycle in HeLa |
GSE35584 |
RNA-seq from ENCODE/HudsonAlpha |
GSE35774 |
Suppression of the antiviral response by an influenza "histone mimic" |
GSE35835 |
Small RNA profiles following TUT knock-down in HeLa |
GSE36070 |
iCLIP analysis of EZH2-interacting RNAs |
GSE36147 |
Next-generation sequencing and microarray-based interrogation of microRNAs from formalin-fixed, paraffin-embedded tissue: Assessment of cross-platform concordance. |
GSE36173 |
Base Resolution Analysis of 5-Hydroxymethylcytosine in the Mammalian Genome |
GSE36185 |
mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription |
GSE36200 |
RAMPAGE dataset for the human K562 cell line |
GSE36204 |
Epigenomic enhancer profiling defines a signature of colon cancer [ChIP-seq] |
GSE36213 |
Profiling of transcription start site expression in Drosophila and the human K562 cell line using RAMPAGE |
GSE36217 |
Comparison of systematic sequencing errors using spike-in standards |
GSE36266 |
Small RNA-seq and gene expression analysis reveal a miRNA profile of cancer-susceptibility in ATM deficient human mammary epithelial cells (Small RNA-Seq) |
GSE36267 |
Small RNA-seq and gene expression analysis reveal a miRNA profile of cancer-susceptibility in ATM deficient human mammary epithelial cells |
GSE36338 |
A Role for Small RNAs in DNA Double-Strand Break Repair |
GSE36401 |
Epigenomic enhancer profiling defines a signature of colon cancer |
GSE36522 |
Transcriptome of chronic myeloid leukemia blood in early disease based on RNA-seq method |
GSE36570 |
OSKM factors cooperatively engage chromatin to initiate reprogramming |
GSE36616 |
Lamin B1 depletion in senescent cells triggers large-Scale changes in gene expression and in the chromatin landscape[ChIP-seq] |
GSE36641 |
Lamin B1 depletion in senescent cells leads to large-scale changes in the chromatin landscape |
GSE36863 |
DEEP SEQUENCING OF MODELS OF BREAST DUCTAL CARCINOMA IN SITU REVEALS ALDH5A1 AS A NOVEL POTENTIAL THERAPEUTIC TARGET |
GSE36866 |
High-throughput transcriptome sequencing of an AML-M2 patient in two stages: primary tumor and remission. |
GSE36979 |
Genome-wide maps of nucleosome occupancy in human lymphoblastoid cell lines |
GSE37001 |
METTL3 KD in HepG2 cells |
GSE37002 |
m6A mapping in human RNA (with treatments) |
GSE37003 |
m6A mapping in human RNA (untreated) |
GSE37004 |
m6A mapping in mouse RNA (mouse liver and human brain) |
GSE37005 |
Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq |
GSE37345 |
FoxA1 inhibits androgen receptor expression and suppresses prostate cancer metastasis [LNCaP, ChIP-seq] |
GSE37376 |
Vascular histone deacetylation by pharmacological HDAC inhibition [TSA, RNA-seq] |
GSE37377 |
Vascular histone deacetylation by pharmacological HDAC inhibition [TSA, ChIP-seq] |
GSE37378 |
Vascular histone deacetylation by pharmacological HDAC inhibition |
GSE37403 |
Genome-wide analysis of the SNAPc complex [ChIP-Seq] |
GSE37454 |
Base-pair resolution DNA methylation sequencing reveals profoundly divergent epigenetic landscapes in Acute Myeloid Leukemia |
GSE37521 |
RNA-Seq Analysis Reveals Different Dynamics of Differentiation of Human Dermis- and Adipose-derived Stromal Stem Cells |
GSE37524 |
Mixture models and wavelet transforms reveal high confidence RNA-protein interaction sites in MOV10 PAR-CLIP data |
GSE37560 |
Individual-nucleotide resolution CLIP and high-throughput sequencing to map hnRNP L-RNA interactions in HeLa cells |
GSE37562 |
hnRNP L-RNA in HeLa |
GSE37616 |
Genome-wide microRNA expression analysis of clear cell Renal Cell Carcinoma by next generation deep sequencing |
GSE37726 |
A novel miRNA produced during lytic HSV-1 infection is important for efficient replication in tissue culture. |
GSE37752 |
Oncogene-Mediated Alterations in Chromatin Conformation |
GSE37764 |
A high dimensional deep sequencing study of non-small cell lung adenocarcinoma in never-smoker Korean females [Seq] |
GSE37765 |
A high dimensional deep sequencing study of non-small cell lung adenocarcinoma in never-smoker Korean females |
GSE37916 |
FAIRE-seq in primary human megakaryocytes, erythroblasts and monocytes |
GSE38006 |
Next-generation sequencing reveals HIV-1-mediated suppression of T cell activation and RNA processing and the regulation of non-coding RNA expression in a CD4+ T cell line |
GSE38127 |
Guthrie card methylomics identifies temporally stable epialleles that are present at birth in humans (Bisulfite-Seq) |
GSE38128 |
Guthrie card methylomics identifies temporally stable epialleles that are present at birth in humans |
GSE38403 |
Integrative Epigenomic Analysis Identifies Biomarkers and Therapeutic Targets in Adult B-Acute Lymphoblastic Leukemia [ChIP-seq] |
GSE38442 |
Independence of Repressive Histone Marks and Chromatin Compaction during Senescent Heterochromatic Layer Formation (ChIP-Seq) |
GSE38448 |
Independence of Repressive Histone Marks and Chromatin Compaction during Senescent Heterochromatic Layer Formation |
GSE38483 |
Global DNA methylation study of trisomy 8 AML |
GSE38495 |
Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells |
GSE38567 |
Genome-wide profiling of target genes for the systemic lupus erythematosus-associated transcription factors IRF5 and STAT4 |
GSE38674 |
Genomic DNA in Normal and Cancerous Prostate Cells |
GSE38676 |
Expression Analysis of Normal and Cancerous Prostate Cells |
GSE38677 |
Mapping of Transcription Start Sites of Normal and Cancerous Prostate Cells |
GSE38683 |
H3K27me3 Marks in Normal and Cancerous Prostate Cells |
GSE38685 |
Normal and Cancerous Prostate Cells |
GSE38805 |
Transcriptomes of germinal zones of human and mouse fetal neocortex suggest a role of extracellular matrix in progenitor self-renewal. |
GSE38809 |
Bubble-seq Analysis of the Human Genome Reveals Distinct Chromatin-Mediated Mechanisms for Regulating Early- and Late-Firing Origins |
GSE38993 |
The transposable element composition of human lincRNAs reveals a role for HERVH elements to promote stem cell specific expression of lincRNAs |
GSE39068 |
Comparative genome-wide DNA methylation analysis of colorectal tumor and matched normal tissues |
GSE39086 |
DGCR8 HITS-CLIP reveals novel functions for the Microprocessor (CLIP-seq) |
GSE39096 |
Spark: A navigational paradigm for genomic data exploration |
GSE39241 |
FoxA1 binding in asynchronous and mitotic HUH7 cells |
GSE39243 |
Expression and FoxA1 binding in asynchronous and mitotic HUH7 cells |
GSE39263 |
Modulation of gene expression by ZNF143, THAP11 and NOTCH1 via overlapping binding sites in mammalian cells |
GSE39277 |
Corepressors (NCoR and SMRT) as well as Coactivators are Recruited to Positively Regulated 1α,25-Dihydroxyvitamin D3-Responsive Genes |
GSE39305 |
A receptor tyrosine kinase network comprised of FGFRs, EGFR, ERBB2, and MET drives growth and survival of HNSCC cell lines. |
GSE39527 |
Identification of microarray probe signals constantly present in multiple sample types (part 2) |
GSE39528 |
Identification of microarray probe signals constantly present in multiple sample types |
GSE39604 |
DNA Methylome in Human Peripheral Blood Monocytes |
GSE39879 |
FoxA1 specifies unique androgen and glucocorticoid receptor binding events in prostate cancer cells (HTS) |
GSE39880 |
FoxA1 specifies unique androgen and glucocorticoid receptor binding events in prostate cancer cells |
GSE39912 |
Genome Wide Profiling of p53 Response to Differentiation or DNA Damage of Human Embryonic Stem Cells |
GSE39998 |
NKX2-1 occupancy in human lung adenocarcinoma cell lines |
GSE40050 |
Persistent androgen receptor-mediated transcription in castration-resistant prostate cancer under androgen-deprived conditions |
GSE40129 |
GATA3 acts upstream of FOXA1 in mediating ER binding by shaping enhancer accessibility |
GSE40131 |
Synthetic cationic peptide IDR-1018 modulates human macrophage differentiation |
GSE40236 |
Small RNA and mRNA profiles following TUT knock-down in HeLa |
GSE40372 |
Identification of a specific reprogramming-associated epigenetic signature in human induced pluripotent stem cells |
GSE40499 |
Evolution of mammalian miRNA genes |
GSE40591 |
Genome-wide analysis of BRCA1 and PALB2 [ChIP-seq and RNA-seq] |
GSE40617 |
iMir: An integrated pipeline for high-throughput miRNA-Seq data analysis |
GSE40632 |
Genome-wide analysis of the Integrator complex (HTS) |
GSE40673 |
An allele-aware approach identifies altered nuclear associations of the contracted D4Z4 array at the FSHD locus |
GSE40740 |
Genome wide co-localization of Polycomb orthologs and their effects on gene expression in human fibroblasts |
GSE40762 |
Genome-wide mapping of FOXM1 binding reveals co-binding with oestrogen receptor alpha in breast cancer cells (ChIP-seq) |
GSE40767 |
Genome-wide mapping of FOXM1 binding reveals co-binding with estrogen receptor alpha in breast cancer cells |
GSE40778 |
CLIP-seq of eIF4AIII reveals transcriptome-wide mapping of the human exon junction complex |
GSE40890 |
Characteristics of Cross-Hybridization and Cross-Alignment in Pseudo-Xenograft samples by RNA-Seq and Microarrays [RNA-Seq] |
GSE40892 |
Characteristics of Cross-Hybridization and Cross-Alignment in Pseudo-Xenograft samples by RNA-Seq and Microarrays |
GSE40955 |
Allele-specific Methylation of Human Placental Tissue |
GSE41006 |
Genome-wide identification of MBD2 and MBD3 binding sites by ChIP-seq |
GSE41010 |
Differential roles for MBD2 and MBD3 at methylated CpG islands, active promoters and exon sequences |
GSE41048 |
Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues (ChIP-Seq and MeDIP-Seq) |
GSE41050 |
Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues |
GSE41074 |
Next Generation Sequencing Facilitates Quantitative Analysis of Argonaute 2 (Ago2)-immunoprecipitation (IP) after miR-195 or miR-497 overexpression in HepG2 |
GSE41081 |
Argonaute 2 |
GSE41124 |
YAP mediates crosstalk between the Hippo and PI3K-TOR pathway by suppressing PTEN via miR-29 |
GSE41343 |
Genome-wide DNA methylation profiles of non-small cell lung carcinomas and control lung tissues |
GSE41357 |
Ago HITS-CLIP in KSHV-infected primary effusion lymphoma (PEL) cell lines BCBL-1 and BC-3 |
GSE41437 |
The viral and cellular microRNA targetome in lymphoblastoid cell lines |
GSE41529 |
Genome-wide analysis of the SNAPc complex |
GSE41553 |
comprehensive chromatin interaction in TNF alpha stimulated HUVECs |
GSE41561 |
A novel proteomic approach reveals GREB1 as an Estrogen Receptor co-factor |
GSE41745 |
Transcriptional Profiling of Psoriasis Using RNA-seq Reveals Previously Unidentified Differentially Expressed genes |
GSE42006 |
Translatome of A549, H1299 and HBE cells |
GSE42074 |
Global DNA Hypermethylation in Down Syndrome Placenta [Bisulfite-Seq] |
GSE42142 |
Global DNA Hypermethylation in Down Syndrome Placenta [RNA-Seq] |
GSE42144 |
Global DNA Hypermethylation in Down Syndrome Placenta |
GSE42146 |
RECURRENT SETBP1 MUTATIONS IN ATYPICAL CHRONIC MYELOID LEUKEMIA |
GSE42147 |
Limitations and possibilities of low cell number ChIP-seq |
GSE42211 |
Genome wide occupancy of SUMO machinery in proliferative and Ras-induced senescent human primary fibroblasts |
GSE42212 |
Quantitative analysis of proliferative and Ras-induced senescent human primary fibroblasts transcriptomes |
GSE42213 |
SUMO is an Integral and Instructive Component of Chromatin in Cell Growth and Senescence |
GSE42374 |
Histone modification analysis in TGFbeta/TNFalpha treated A549 spheroid cultures |
GSE42375 |
chromatin reprogramming and differential gene expression in a model of EMT (spheroid A549 treated with TGF/TNF) |
GSE42386 |
Analysis of DNA methylation dynamics at Alu elements during human B cell activation |
GSE42590 |
Genome-wide DNA methylation profiling of human dorsolateral prefrontal cortex |
GSE42735 |
Genome-wide transcriptome profiling of SK-Mel-28, UACC-62 and HCT-116 cells stably expressing scrambled shRNA and RAB7 shRNA |
GSE42790 |
Quality evaluation of Methyl Binding Domain based kits for enrichment DNA-methylation sequencing |
GSE42948 |
Two New Stromal Signatures Stratify Breast Cancers with Different Prognosis |
GSE43070 |
Genome-wide Analysis of Chromatin Interactions in Human Cells |
GSE43152 |
A unique epigenetic signature is associated with active DNA replication loci in human embryonic stem cells |
GSE43253 |
Antitumor activity of a pyrrole-imidazole polyamide |
GSE43362 |
Transcriptional profiles of PA1 teratoma cells transfected by RIPK1, RIPK2, RIPK3, or RIPK4 |
GSE43472 |
Regional Differences in gene expression and promoter usage in aged human brains |
GSE43520 |
The evolution of lncRNA repertoires and expression patterns in tetrapods |
GSE43539 |
H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation [ChIP-Seq] |
GSE43542 |
H3K4me3 Interactions with TAF3 Regulate Preinitiation Complex Assembly and Selective Gene Activation |
GSE43572 |
Circular RNAs are a large class of animal RNAs with regulatory potency (RNA-Seq) |
GSE43573 |
Circular RNAs are a large class of animal RNAs with regulatory potency (PAR-CLIP) |
GSE43574 |
Circular RNAs are a large class of animal RNAs with regulatory potency |
GSE43579 |
Genome-wide maps of HSF1 and HSF2 binding sites in cycling and mitotic human K562 cells in optimal growth conditions and upon heat stress |
GSE43720 |
Redefinition of Human Androgen Responsive Elements [MNase-Seq, ChIP_seq] |
GSE43791 |
Redefinition of Human Androgen Responsive Elements |
GSE43834 |
A Stable Transcription Factor Complex Nucleated by Dimeric AML1-ETO Controls Leukaemogenesis |
GSE43871 |
RNA-Sequencing and promoter chromatin profiles analysis of High Glucose Treated Monocytes |
GSE43909 |
AGO-PAR-CLIP of DG75 and BCBL-1 |
GSE43925 |
RNA-Sequencing Analysis of High Glucose Treated Monocytes Reveals Novel Transcriptome Signatures and associated Epigenetic Profiles |
GSE43986 |
The Estrogen receptor alpha regulated NEAT1 long non-coding RNA promotes prostate cancer progression [RNA-Seq] |
GSE43988 |
The Estrogen receptor alpha regulated NEAT1 long non-coding RNA promotes prostate cancer progression |
GSE44220 |
Identification of SF-1 genomic binding sites in conditions of basal and increased dosage in the H295R adrenocortical tumor cell line |
GSE44224 |
Mechanisms of dosage-dependent regulation of gene expression by transcription factor SF-1 |
GSE44236 |
ChIP-seq of three core components of the circadian clock (BMAL1, CLOCK and CRY1) in unsynchronized human U2OS cells |
GSE44376 |
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 1) |
GSE44377 |
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 2) |
GSE44378 |
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates (part 3) |
GSE44400 |
Macro histone variants preserve cell identity by preventing the gain of H3K4me2 during reprogramming |
GSE44404 |
Remodeling of Ago2-mRNA interactions upon cellular stress reflects miRNA complementarity and correlates with altered translation rates |
GSE44416 |
Genome-wide binding of TEAD4 in gastric cancer cell lines MKN28 and SNU216 |
GSE44420 |
BACH2 mediates negative selection and p53-dependent tumor suppression at the pre-B cell receptor checkpoint. |
GSE44551 |
PAX5 overexpression is not enough to reestablish the mature B-cell phenotype in classical Hodgkin lymphoma (ChIP-Seq) |
GSE44615 |
Identification of mRNAs bound and regulated by human LIN28 proteins and molecular requirements for RNA recognition [PAR-CLIP] |
GSE44616 |
Identification of mRNAs bound and regulated by human LIN28 proteins and molecular requirements for RNA recognition |
GSE44639 |
Altered microRNA expression in individuals at high risk of type 1 diabetes |
GSE44672 |
Activation and repression by oncogenic Myc shapes tumour-specific gene expression profiles |
GSE44737 |
MBD3 localization by ChIP-seq |
GSE44769 |
Epstein-Barr virus maintains lymphomas via its miRNAs |
GSE44953 |
Interleukin-27 treated human macrophages induce the expression of novel miRNAs which may mediate anti-viral properties (RNA-seq) |
GSE44957 |
Interleukin-27 treated human macrophages induce the expression of novel miRNAs which may mediate anti-viral properties |
GSE45023 |
Genome-wide maps of chromatin state for H3.3 tagged cells |
GSE45024 |
Genome-wide maps of chromatin state for HIRA, UBN1 and ASF1a |
GSE45025 |
Placing the HIRA histone chaperone complex in the chromatin landscape |
GSE45124 |
Genome wide mapping of PSF binding sites in prostate cancer cells |
GSE45162 |
Mutational activation of a mechanosensitive megachannel drives metastatic cell survival. |
GSE45241 |
G-Quadruplex structures are stable and detectable in human genomic DNA. |
GSE45332 |
Genome-wide total RNA and MBD-sequencing in HCT116 and DKO cells as a global re-expression model [RNA-Seq] |
GSE45333 |
Genome-wide total RNA and MBD-sequencing in HCT116 and DKO cells as a global re-expression model [MBD-Seq] |
GSE45334 |
Genome-wide total RNA and MBD-sequencing in HCT116 and DKO cells as a global re-expression model |
GSE45335 |
Genome-wide methylation and expression analysis of two breast cancer cell lines [RNA-Seq] |
GSE45337 |
Genome-wide methylation and expression analysis of two breast cancer cell lines |
GSE45341 |
Fundamental differences in promoter CpG island DNA hypermethylation between human cancer and genetically engineered mouse models of cancer [RRBS] |
GSE45342 |
Fundamental differences in promoter CpG island DNA hypermethylation between human cancer and genetically engineered mouse models of cancer |
GSE45419 |
An Integrated Model of the Transcriptome Landscape of HER2-Positive Breast Cancer |
GSE45420 |
DNAseq data from human ovarian carcinoma cell lines subjected to shRNA TRC1.0 library |
GSE45441 |
SFMBT1 Functions with LSD1 to Regulate Expression of Canonical Histone Genes and Chromatin-Related Factors [ChIP-Seq] |
GSE45489 |
SFMBT1 Functions with LSD1 to Regulate Expression of Canonical Histone Genes and Chromatin-Related Factors |
GSE45506 |
miRNAs associated with the different human Argonaute proteins |
GSE45510 |
Stratification of Leiomyosarcoma molecular subtypes by 3' end RNA-sequencing: Toward precision medicine |
GSE45715 |
Genome-wide analysis of BRCA1 and PALB2 |
GSE45734 |
Changes in gene expression profiles of circulating B cells after influenza vaccination in healthy human subjects |
GSE45735 |
Changes in PBMC gene expression profiles after influenza vaccination in healthy human subjects |
GSE45738 |
Addiction of t(8;21) and inv(16) AML to native RUNX1 [ChIP-Seq data] |
GSE45746 |
MBD-seq of GBP Muscle samples |
GSE45747 |
Weight loss after gastric bypass surgery in human obesity induces promoter methylation |
GSE45748 |
Addiction of t(8;21) and inv(16) AML to native RUNX1 |
GSE45764 |
Effect of influenza vaccination on PBMC and B cell gene expression profiles in healthy humans |
GSE45822 |
Functional Importance of eRNAs for Estrogen-dependent Gene Transcriptional Activation |
GSE45883 |
Retroelements and DUX4 Create Primate-specific Promoters for Germline Genes |
GSE45910 |
Apparently Balanced Chromosomal Rearrangements (BCRs) as a model for random mutagenesis in humans |
GSE45982 |
EZH2 is required for germinal center formation and somatic EZH2 mutations promote lymphoid transformation |
GSE46044 |
A compendium of hematopoietic regulators, chromatin modifiers and basal transcription factors occupy CBF-MYH11/RUNX1 target genes |
GSE46131 |
A Study of Small RNAs from Cerebral Neocortex of Pathology-Verified Alzheimer’s Disease, Dementia with Lewy Bodies, Hippocampal Sclerosis, Frontotemporal Lobar Dementia, and Non-Demented Human Controls |
GSE46217 |
Inactive or moderately active human promoters are enriched for inter-individual epialleles [Seq] |
GSE46220 |
Inactive or moderately active human promoters are enriched for inter-individual epialleles |
GSE46489 |
Small RNA sequencing of human preovulatory cumulus and mural granulosa cells |
GSE46508 |
Small RNA-seq of human granulosa cells reveals miRNAs in FSHR and aromatase genes |
GSE46516 |
The permanent reduction of TIA proteins molds expression transcriptome in HeLa cells |
GSE46561 |
A genome-wide map of transcription start sites specific for acute promyelocytic leukemia reveals deregulation of full-length transcripts |
GSE46595 |
Integrated epigenomic analyses of enhancer as well as promoter regions in gastric cancer |
GSE46597 |
Integrated epigenomic analyses of enhancer as well as promoter regions in gastric cancer |
GSE46598 |
Integrated epigenomic analyses of enhancer as well as promoter regions in gastric cancer |
GSE46611 |
MicroRNA Target Site Identification by Integrating Sequence and Binding Information |
GSE46622 |
High-throughput sequencing of matched colorectal normal, tumor and metastasis tissues and proof-of principal bioinformatics modeling of therapeutic consequences of miRNA applications |
GSE46641 |
Diverse stresses dramatically alter genome-wide p53 binding and transactivation landscape in human cancer cells (ChIP-seq) |
GSE46642 |
Diverse stresses dramatically alter genome-wide p53 binding and transactivation landscape in human cancer cells |
GSE46718 |
WTAP is a novel oncogenic protein in Acute Myeloid Leukemia |
GSE46805 |
Expression data from Uninfected and BRAF600V induced melanocytes |
GSE46817 |
Expression data from 7 Human Melanomas |
GSE46818 |
Wnt-signaling potentiates nevogenesis. |
GSE46945 |
DNase I–hypersensitive exons colocalize with promoters and distal regulatory elements |
GSE47117 |
3' RNA-Seq (3'SEQ) analysis gene expression profiling at G1-S transition in human embryonic stem cells (hESCs) and hESC-derived endoderm cells |
GSE47120 |
Effect of ETV1 knockdown on genome wide AR binding in LNCaP Cells |
GSE47152 |
Shear Stress and NOTCH1 Regulate Calcification Related Genes in Human Aortic Valve Endothelium (ChIP-Seq) |
GSE47160 |
Shear Stress and NOTCH1 Regulate Calcification Related Genes in Human Aortic Valve Endothelium |
GSE47164 |
Identification of several potential chromatin binding sites of HOXB7 and its downstream target genes in breast cancer |
GSE47220 |
ETS factors reprogram the androgen receptor cistrome and prime prostate tumorigenesis in response to PTEN loss |
GSE47462 |
A shared transcriptional program in early breast neoplasias despite genetic and clinical distinctions |
GSE47481 |
NELF-dependent transcription activation |
GSE47535 |
Genome-wide map of GATA6 DNA binding in human PDAC cells |
GSE47537 |
Gata6 |
GSE47590 |
5-hydroxymethylcytosine marks promoters in colon that resist hypermethylation in cancer [seq] |
GSE47592 |
5-hydroxymethylcytosine marks promoters in colon that resist hypermethylation in cancer |
GSE47604 |
Transcriptome-wide interaction mapping of hnRNP L in human T cells with CLIP-seq |
GSE47629 |
Modulation of enhancer looping and differential gene targeting by Epstein-Barr virus transcription factors directs epigenetic reprogramming |
GSE47784 |
Cooperative transcriptional repression by BCL6 and BACH2 in germinal center B-cell differentiation |
GSE47843 |
Sequencing and genome-wide mapping of 146 bp mono-nucleosomal DNA from human and bovine sperm |
GSE47933 |
Impact of library preparation on downstream analysis and interpretation of RNA-seq data: comparison between Illumina PolyA and NuGEN Ovation protocol |
GSE47991 |
Identification of genetic variants that affect histone modifications in human cells |
GSE47997 |
Global regulation of alternative splicing by adenosine deaminase acting on RNA (ADAR) [RNA-seq] |
GSE47998 |
Global regulation of alternative splicing by adenosine deaminase acting on RNA (ADAR) |
GSE48037 |
RNA methylation-dependent RNA processing controls the speed of the circadian clock |
GSE48065 |
Regulation of FAS Exon Definition and Apoptosis by the Ewing Sarcoma Protein |
GSE48066 |
Regulation of NUMB alternative splicing by RBM5, RBM6 and RBM10 controls cancer cell proliferation (CLIP-Seq) |
GSE48213 |
Transcriptional profiling of a breast cancer cell line panel using RNAseq technology |
GSE48215 |
Exome sequencing of a panel of breast cancer cell lines to identify mutations |
GSE48216 |
Modeling precision treatment of breast cancer |
GSE48305 |
Orchestrated intron retention regulates normal granulocyte differentiation [RNA-Seq] |
GSE48307 |
Orchestrated intron retention regulates normal granulocyte differentiation |
GSE48602 |
Miz1 is required to maintain autophagic flux |
GSE48831 |
Viral small RNAs in Sindbis virus-infected mammalian cells |
GSE48930 |
Genome-wide mapping of SPDEF and ESR1 binding in MCF-7 cells (ChIP-seq) |
GSE48931 |
Master regulators of FGFR2 signalling and breast cancer risk |
GSE49008 |
Genome wide profiling of RNA Polymerase II upon knock-down or overexpression of RECQL5 |
GSE49133 |
Mapping of nascent RNA upon release of DRB in WT and KD of RECQL5 |
GSE49134 |
RECQL5 Controls Transcript Elongation and Suppresses Transcription-Associated Genome Instability |
GSE49155 |
Profiling premalignant lesions in lung squamous cell carcinomas identifies mechanisms involved in stepwise carcinogenesis |
GSE49159 |
mRNA differential expression analysis in a human ex vivo model of chronic wounds |
GSE49295 |
Inhibition of Androgen Receptor and β-catenin activity in prostate cancer |
GSE49302 |
Hot spots of DNA double-strand breaks and genomic contacts of human rDNA units are involved in epigenetic regulation [DSBs] |
GSE49320 |
Genome-wide map of GATA6 DNA binding in human CRC cells |
GSE49402 |
Transcription factor binding in human cells occurs in dense clusters formed around cohesin anchor sites |
GSE49417 |
The conserved organization of the human and mouse transcriptomes |
GSE49428 |
Global analysis of NFATc1 binding and histone marks in VEGF-activated endothelial cells |
GSE49429 |
Genome-wide approaches reveal functional VEGF-inducible NFATc1 binding to the angiogenesis-related genes in endothelium |
GSE49521 |
Genomic Interaction Profiles in Breast Cancer Reveal Altered Chromatin Architecture |
GSE49546 |
RRHP : a tag-based approach for 5-hydroxymethylcytosine mapping at single-site resolution |
GSE49816 |
Evaluation of quantitative miRNA gene expression platforms in the microRNA Quality Control (miRQC) study |
GSE50064 |
p53 shapes genome-wide changes in small non-coding RNA expression during the human DNA damage response |
GSE50144 |
Genome-wide maps of H3K27ac, PPARβ/δ and Pol II localization in HUVECs |
GSE50386 |
Epigenomic plasticity enables human pancreatic alpha to beta cell reprogramming |
GSE50413 |
Comparison of Genome-Wide Binding of MyoD in Normal Human Myogenic Cells and Rhabdomyosarcomas Identifies Regional and Local Suppression of Promyogenic Transcription Factors (MyoD ChIP-Seq profiling) |
GSE50415 |
Comparison of Genome-Wide Binding of MyoD in Normal Human Myogenic Cells and Rhabdomyosarcomas Identifies Regional and Local Suppression of Promyogenic Transcription Factors |
GSE50429 |
Deep sequencing of exosomal and cellular miRNAs in MDA-MB-231 and MCF-10A cells |
GSE50452 |
High-throughput identification of miRNA targets using CLASH (crosslinking, ligation and sequencing of hybrids) |
GSE50456 |
Genome wide DNA methylation analysis of leukemia and reprogrammed leukemia cells |
GSE50491 |
Regulation of the KEAP1/NRF2 oxidative stress response pathway by BRD4 in prostate and colorectal cancer |
GSE50599 |
RNA-seq transcriptomes of term not in labour and term in labour human myometrial tissue |
GSE50610 |
Role of DNA methylation in modulating transcription factor occupancy |
GSE50630 |
Whole Transcriptomic Sequencing of Metastatic Castration Resistant Prostate Cancer Samples |
GSE50721 |
Whole transcriptome profiling of the two major subtypes of diffuse large B cell lymphoma |
GSE50723 |
Whole genome mapping of STAT3 binding sites in the two major subtypes of diffuse large B cell lymphoma |
GSE50724 |
Correlation between STAT3 binding presence and gene expression levels in subtypes of diffuse large B cell lymphoma |
GSE50781 |
Primate iPS cells as tools for evolutionary analyses |
GSE50958 |
Genome-wide epigenetic analyses and Transcriptional analysis in NB4 cells expressing PML-RARalpha |
GSE50976 |
Nascent strand with BrdU or lambda exonuclease |
GSE50978 |
High-Resolution and Allele-Specific Genome-wide Replication Profiles in Human Primary Basophilic Erythroblasts |
GSE51065 |
Proteomic and Genomic Analysis of transcription factor TFII-I reveals insight into the response to cellular stress |
GSE51117 |
Genome wide ChIP-Seq profiles of p300 and CBP in control and cells expressing HSP70K71E |
GSE51118 |
p300 is a preferred client protein for Nuclear Chaperones |
GSE51239 |
DNA methylation dynamics of the human pre-implantation embryo |
GSE51268 |
Genome-wide analysis of p53 binding protein |
GSE51274 |
Breast tumor specific mutation in GATA3 impacts protein stability and genomic location |
GSE51281 |
EGFRvIII/STAT3 targets in glioblastoma pathogenesis |
GSE51334 |
DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions |
GSE51336 |
Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution |
GSE51341 |
Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence |
GSE51509 |
Smad3, Smad4 and TTF-1/NKX2-1 binding sites in H441/A549 lung cancer cell lines |
GSE51510 |
Role of TTF-1/NKX2-1, Smad3 and Smad4 on lung cancer cell lines |
GSE51565 |
Comparative DNA methylome analysis of endometrioid adenocarcinoma, uterine papillary serous carcinoma, and normal endometrium |
GSE51621 |
Comprehensive Functional Annotation of 77 Prostate Cancer Risk Loci |
GSE51672 |
A histone H3.3 Lysine 36 Trimethylation Reader Connects Chromatin to Regulated Pre-mRNA Processing |
GSE51673 |
Chromatin maps of human ASXL1, FOXK1 and O-GlcNAc |
GSE51687 |
Estrogen induces global reorganization of chromatin structure in human breast cancer cells |
GSE51705 |
ChIP-Seq experiments of KLF5, GATA4 and GATA6 in YCC3/AGS/KATOIII cell lines |
GSE51706 |
Integrative study of cooperative lineage-survival oncogenes in gastric cancer |
GSE51726 |
Genome-wide Dnase-Seq profiles in Hodgkin's and non-Hodgkin's lymphoma |
GSE51774 |
Changes in the expression of miR-381 and miR-495 are inversely associated with the expression of the MDR1 gene and development of multi-drug resistance |
GSE51799 |
Huntington’s disease biomarker progression profile identified by transcriptome sequencing in peripheral blood |
GSE51814 |
Genome-wide DNase-Seq and methylation profiles in Hodgkin's and non-Hodgkin's lymphoma |
GSE52179 |
A genome-wide analysis of open chromatin in human tracheal epithelial cells reveals novel candidate regulatory elements for lung function (DNase-hypersensitivity) |
GSE52181 |
A genome-wide analysis of open chromatin in human tracheal epithelial cells reveals novel candidate regulatory elements for lung function |
GSE52248 |
Identification of mRNAs and lincRNAs associated with lung cancer progression using next-generation RNA sequencing from laser micro-dissected archival FFPE tissue specimens |
GSE52314 |
Epigenetic regulation of the MEG3-DLK1 microRNA cluster in human Type 2 diabetic islets |
GSE52421 |
Genome-wide ChIP sequence analysis of KSHV-infected primary effusion lymphoma (PEL) cell line BCBL-1 and human umbilical vein endothelial TIVE-LTC cells. |
GSE52437 |
Switch Enhancer Elements Control Cell Fate in Human Embryonic Stem Cells (ChIP-Seq) |
GSE52440 |
Switch Enhancer Elements Control Cell Fate in Human Embryonic Stem Cells |
GSE52469 |
Cyclin-dependent kinase 6 is a chromatin-bound cofactor for nuclear factor kappaB-dependent gene expression [ChIP-Seq] |
GSE52470 |
Cyclin-dependent kinase 6 is a chromatin-bound cofactor for nuclear factor kappaB-dependent gene expression |
GSE52590 |
Heterogeneous DNA methylation changes in acute myeloid leukemia associate with cancer-specific gene expression signatures and disruption of the hematopoietic regulatory network |
GSE52666 |
Distinct gene expression profiles between overt GIST and miniGIST |
GSE52848 |
Expression data from ER32 and ER32.40HT IMR90 |
GSE52860 |
The SAGA coactivator complex acts on the whole transcribed genome and is required for RNA polymerase II transcription [HeLa cells] |
GSE52914 |
Tyrosine phosphorylation of RNA Polymerase II CTD is associated with antisense promoter transcription and active enhancers in mammalian cells |
GSE53080 |
Comparative RNA-sequencing analysis of myocardial and circulating small RNAs in human heart failure and their utility as biomarkers [small RNA-seq] |
GSE53081 |
Comparative RNA-sequencing analysis of myocardial and circulating small RNAs in human heart failure and their utility as biomarkers |
GSE53133 |
Composite macroH2A/NRF-1 Nucleosomes Suppress Noise and Generate Robustness in Gene Expression |
GSE53220 |
Genomic analyses reveal miR-137 broad impact on genes associated with malignant transformation and neuronal differentiation in glioblastoma cells |
GSE53292 |
Transcriptomic analysis of Plasmodium PBANKA, PBSLTRiP-KO, PB268-KO parasite infected and uninfected host cell |
GSE53356 |
Expression data from PD32 and PD88 IMR90 |
GSE53357 |
Genome-wide screening for ELF4-binding sites. |
GSE53491 |
Phenotype specific analyses of p53 reveal distinct regulatory mechanism for chronically activated p53 |
GSE53586 |
A Salmonella-encoded microRNA-like RNA facilitates bacterial invasion and intracellular replication via suppressing host cell inducible nitric oxide synthase |
GSE53628 |
Analysis of Allelic bias in gDNA, cDNA and ChIP with H3K27me3 and H3K36me3 antibody with multiplexed padlock probe approach |
GSE53695 |
nELAVL HITS-CLIP in Alzheimer's Disease patients |
GSE53699 |
nELAVL HITS-CLIP and RNA-seq in Alzheimer's Disease patients and IMR-32 neuroblastoma cells |
GSE53811 |
Mapping of genome-wide DSBs in HEK293T cells using the RAFT procedure. |
GSE53844 |
Undifferentiated pleomorphic sarcoma recapitulates the expressional profile of Subtype II Leiomyosarcoma |
GSE53938 |
The Demethylase JMJD2C/KDM4C Localizes to H3K4me3 Positive Transcription Start Sites (ChIP-seq KYSE150 cell line) |
GSE54122 |
Next Generation Sequencing of MCF-7 and MDA-MB-435 cells |
GSE54159 |
Transcriptome sequencing of nasopharyngeal carcinoma model system (mRNA) |
GSE54161 |
Transcriptome sequencing of nasopharyngeal carcinoma model system (miRNA) |
GSE54174 |
Transcriptome sequencing of nasopharyngeal carcinoma model system |
GSE54344 |
Aberrant chromatin acetylation in MLL-AF9 leukemia mediates the response to HDAC inhibition (ChIP-Seq) |
GSE54348 |
Aberrant chromatin acetylation in MLL-AF9 leukemia mediates the response to HDAC inhibition |
GSE54413 |
Genome-wide Transcriptional Profiling of Skin and Dorsal Root Ganglia after Ultraviolet-B-Induced Inflammation |
GSE54511 |
Different molecular pathways along with pathogenesis of three subtypes of Leiomyosarcoma |
GSE54592 |
ER ChIP-seq of Androstenedione treated Letrozole Resistant Breast Cancer Cell line |
GSE54602 |
Developmental transcriptome analysis of human erythropoiesis |
GSE54693 |
Genome wide profiling of MBD2 binding |
GSE54734 |
Distinct expression profiles of soft tissue sarcomas |
GSE54856 |
VDR primary targets by genome-wide transcriptional profiling |
GSE54906 |
Extensive Evolutionary Changes in Regulatory Element Activity during Human Origins Are Associated with Altered Gene Expression and Positive Selection [DGE-seq] |
GSE54907 |
Extensive Evolutionary Changes in Regulatory Element Activity during Human Origins Are Associated with Altered Gene Expression and Positive Selection [Dnase-seq] |
GSE54908 |
Extensive Evolutionary Changes in Regulatory Element Activity during Human Origins Are Associated with Altered Gene Expression and Positive Selection |
GSE54909 |
Vascular histone deacetylation by pharmacological HDAC inhibition [SAHA, ChIP-seq] |
GSE54911 |
Vascular histone deacetylation by pharmacological HDAC inhibition [TSA, MBD-seq] |
GSE54912 |
Vascular histone deacetylation by pharmacological HDAC inhibition [SAHA, RNA-seq] |
GSE54983 |
DNA methylation data from Reduced Representation Bisulphite sequencing in the Dutch Hunger Winter Families Study |
GSE55007 |
Cooperativity and Equilibrium with FOXA1 Define Androgen Receptor Transcriptional Program |
GSE55053 |
Subtelomeric CTCF and Cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline |
GSE55123 |
Expression data from untreated and Aza treated AML3 cells |
GSE55125 |
Aza treated AML3 cells |
GSE55215 |
Genomewide analysis of QKI-dependent alternative splicing |
GSE55407 |
Classifying leukemia types with chromatin conformation data (ChIP-Seq) |
GSE55408 |
Classifying leukemia types with chromatin conformation data |
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