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Series GSE114718 Query DataSets for GSE114718
Status Public on Oct 29, 2018
Title Systematic detection of host pathways universally inhibited by Plasmodium yoelii parasites for immune intervention
Organism Mus musculus
Experiment type Expression profiling by array
Summary Malaria is a disease with diverse symptoms depending on host immune status and pathogenicity of Plasmodium parasites. The continuous parasite growth within a host suggests mechanisms of immune evasion and/or inhibition. To identify pathways commonly inhibited by malaria infection, we infected C67BL/6 mice with four Plasmodium yoelii strains causing different disease phenotypes and 24 progeny of a genetic cross. mRNAs from mouse spleens day 1 and/or day 4 post infection (p.i.) were hybridized to a mouse microarray to identify activated or inhibited pathways, upstream regulators, and linkages to parasite genetic loci. Strong interferon responses were observed after infection with N67 strain, whereas initial inhibition and later activation of hematopoiesis pathways were found after infection with 17XNL parasite. Inhibition of pathways such as Th1 activation, dendritic cell (DC) maturation, and NFAT immune regulation were observed in mice infected with all the parasite strains day 4 p.i., suggesting universally inhibited immune pathways. Treatment of infected mice with antibodies against T cell receptors OX40 or CD28 to activate malaria-inhibited pathways enhanced host survival. Controlled activation of these pathways may provide important strategies for better disease management and for developing an effective vaccine.
 
Overall design Whole spleen RNA from mice infected with malaria parental strains N67, 17XNL, and 24 individual progeny strains from the cross, harvested 24 hrs post infection. Naive mice received uninfected RBCs. RNA was isolated from three independent replicate infections per strain (different mice). In addition, three to four technical replicates (repeat amplification/label/hybridization) were performed on RNA from parental strain infections.
 
Contributor(s) Xia L, Wu J, Pattaradilokrat S, Tumas K, He X, Huang R, Myers TG, Long CA, Wang R, Su X
Citation(s) 30327482
Submission date May 21, 2018
Last update date Jan 16, 2019
Contact name Timothy G Myers
E-mail(s) [email protected]
Organization name National Institute of Allergy and Infectious Diseases
Department Research Technologies Branch
Lab Genomic Technologies Section
Street address 50 South Drive, Room 5509
City Bethesda
State/province MD
ZIP/Postal code 20892-8005
Country USA
 
Platforms (1)
GPL6887 Illumina MouseWG-6 v2.0 expression beadchip
Samples (102)
GSM3148419 E891#5_1_A8946
GSM3148420 E891#5_2_A8947
GSM3148421 E891#5_3_A8948
Relations
BioProject PRJNA472363

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE114718_Non-normalized_data.txt.gz 26.4 Mb (ftp)(http) TXT
GSE114718_RAW.tar 103.0 Mb (http)(custom) TAR (of TXT)
GSE114718_normalized_data_with_pvalues.txt.gz 28.6 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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