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Status
Public on Aug 15, 2006
Title
Agilent-014693 Human Genome CGH Microarray 244A (Feature number version)
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Homo sapiens
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4411B
Description
This microarray is Agilent’s premium product for human DNA copy-number profiling. Over 236,000 60-mer oligonucleotide probes, specifically optimized for copy-number measurement, span coding and non-coding genomic sequences with median spacing of 7.4 kb and 16.5 kb respectively. This microarray is designed for use with Agilent’s optimized assay protocols, enabling researchers to use nanogram levels of total genomic DNA without complexity reduction. Arrays of this design have barcodes that begin with 16014693 or 2514693. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions. *** A different version of this platform with the Agilent Probe names in the ID column is assigned accession number GPL9128.
Submission date
Aug 15, 2006
Last update date
Oct 26, 2016
Organization
Agilent Technologies
E-mail(s)
[email protected]
Phone
877-424-4536
URL
http://www.agilent.com
Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (2690)
GSM183878 , GSM183879 , GSM183880 , GSM183881 , GSM183882 , GSM183883
GSM183884 ,
GSM183885 ,
GSM188311 ,
GSM188312 ,
GSM188313 ,
GSM188314 ,
GSM188315 ,
GSM188316 ,
GSM188317 ,
GSM188318 ,
GSM188319 ,
GSM188320 ,
GSM188321 ,
GSM188322 ,
GSM188323 ,
GSM188324 ,
GSM188325 ,
GSM188326 ,
GSM188327 ,
GSM188328 ,
GSM226300 ,
GSM226301 ,
GSM226303 ,
GSM226306 ,
GSM226309 ,
GSM226312 ,
GSM226320 ,
GSM231848 ,
GSM231849 ,
GSM231850 ,
GSM231851 ,
GSM231852 ,
GSM231853 ,
GSM231854 ,
GSM231855 ,
GSM231856 ,
GSM231857 ,
GSM231858 ,
GSM278477 ,
GSM287989 ,
GSM287990 ,
GSM301571 ,
GSM301572 ,
GSM301573 ,
GSM301574 ,
GSM301575 ,
GSM301576 ,
GSM301577 ,
GSM301578 ,
GSM301579 ,
GSM301580 ,
GSM305091 ,
GSM317507 ,
GSM317509 ,
GSM318356 ,
GSM318357 ,
GSM318358 ,
GSM318359 ,
GSM318360 ,
GSM318361 ,
GSM318362 ,
GSM318363 ,
GSM318364 ,
GSM318365 ,
GSM318366 ,
GSM318367 ,
GSM318368 ,
GSM318369 ,
GSM318370 ,
GSM318371 ,
GSM318372 ,
GSM318373 ,
GSM318374 ,
GSM318375 ,
GSM318376 ,
GSM318377 ,
GSM318378 ,
GSM318379 ,
GSM318380 ,
GSM318381 ,
GSM318382 ,
GSM318383 ,
GSM318384 ,
GSM318385 ,
GSM318386 ,
GSM318387 ,
GSM318388 ,
GSM318389 ,
GSM318390 ,
GSM318391 ,
GSM318392 ,
GSM318393 ,
GSM318394 ,
GSM318395 ,
GSM318396 ,
GSM318397 ,
GSM322063 ,
GSM322076 ,
GSM322077 ,
GSM322078 ,
GSM322079 ,
GSM322086 ,
GSM322087 ,
GSM322088 ,
GSM322089 ,
GSM322090 ,
GSM322091 ,
GSM322092 ,
GSM322093 ,
GSM322094 ,
GSM372937 ,
GSM373012 ,
GSM373013 ,
GSM373014 ,
GSM373015 ,
GSM373114 ,
GSM373130 ,
GSM373131 ,
GSM373132 ,
GSM373133 ,
GSM373134 ,
GSM373135 ,
GSM373136 ,
GSM373137 ,
GSM373138 ,
GSM373140 ,
GSM373143 ,
GSM373145 ,
GSM373220 ,
GSM373452 ,
GSM373498 ,
GSM373499 ,
GSM373500 ,
GSM373501 ,
GSM373502 ,
GSM373503 ,
GSM373504 ,
GSM373506 ,
GSM373507 ,
GSM373508 ,
GSM373509 ,
GSM373510 ,
GSM373511 ,
GSM373512 ,
GSM373513 ,
GSM373514 ,
GSM373515 ,
GSM373516 ,
GSM373517 ,
GSM373518 ,
GSM378105 ,
GSM378106 ,
GSM378107 ,
GSM378108 ,
GSM378109 ,
GSM378110 ,
GSM378111 ,
GSM378112 ,
GSM378113 ,
GSM378114 ,
GSM378115 ,
GSM378116 ,
GSM378117 ,
GSM378118 ,
GSM378119 ,
GSM378120 ,
GSM378121 ,
GSM378122 ,
GSM378123 ,
GSM378124 ,
GSM378125 ,
GSM378126 ,
GSM378127 ,
GSM378128 ,
GSM378129 ,
GSM378130 ,
GSM378131 ,
GSM378132 ,
GSM378133 ,
GSM378134 ,
GSM378135 ,
GSM378136 ,
GSM378137 ,
GSM378138 ,
GSM378139 ,
GSM378140 ,
GSM378141 ,
GSM378142 ,
GSM378143 ,
GSM378144 ,
GSM378145 ,
GSM378146 ,
GSM378147 ,
GSM378148 ,
GSM378149 ,
GSM378150 ,
GSM378151 ,
GSM378152 ,
GSM378799 ,
GSM378800 ,
GSM378801 ,
GSM378802 ,
GSM429435 ,
GSM429436 ,
GSM429437 ,
GSM429438 ,
GSM429439 ,
GSM429440 ,
GSM429441 ,
GSM429442 ,
GSM429443 ,
GSM429444 ,
GSM434355 ,
GSM434356 ,
GSM434357 ,
GSM434358 ,
GSM434359 ,
GSM434360 ,
GSM434361 ,
GSM434362 ,
GSM434363 ,
GSM434364 ,
GSM434365 ,
GSM434366 ,
GSM434367 ,
GSM434368 ,
GSM434369 ,
GSM434370 ,
GSM434371 ,
GSM434372 ,
GSM434373 ,
GSM434374 ,
GSM434375 ,
GSM434376 ,
GSM434377 ,
GSM434378 ,
GSM436128 ,
GSM436129 ,
GSM458971 ,
GSM458972 ,
GSM458973 ,
GSM458974 ,
GSM458975 ,
GSM458976 ,
GSM458977 ,
GSM458978 ,
GSM458979 ,
GSM458980 ,
GSM458981 ,
GSM458982 ,
GSM458983 ,
GSM458984 ,
GSM458985 ,
GSM458986 ,
GSM478292 ,
GSM478293 ,
GSM478294 ,
GSM478295 ,
GSM478296 ,
GSM478297 ,
GSM478298 ,
GSM478299 ,
GSM478300 ,
GSM478301 ,
GSM478302 ,
GSM478303 ,
GSM478304 ,
GSM478305 ,
GSM478306 ,
GSM478307 ,
GSM478308 ,
GSM478309 ,
GSM478310 ,
GSM478311 ,
GSM478312 ,
GSM478313 ,
GSM478314 ,
GSM478315 ,
GSM478316 ,
GSM478317 ,
GSM478318 ,
GSM478319 ,
GSM478320 ,
GSM478321 ,
GSM478322 ,
GSM478323 ,
GSM478324 ,
GSM478325 ,
GSM478326 ,
GSM478327 ,
GSM478328 ,
GSM492490 ,
GSM492491 ,
GSM492492 ,
GSM492493 ,
GSM492494 ,
GSM495808 ,
GSM495809 ,
GSM495810 ,
GSM495811 ,
GSM498356 ,
GSM498357 ,
GSM498358 ,
GSM498359 ,
GSM498360 ,
GSM498361 ,
GSM506744 ,
GSM506867 ,
GSM506973 ,
GSM516677 ,
GSM525575 ,
GSM525576 ,
GSM525577 ,
GSM525578 ,
GSM525579 ,
GSM525580 ,
GSM525581 ,
GSM525582 ,
GSM525583 ,
GSM525584 ,
GSM525585 ,
GSM525586 ,
GSM525587 ,
GSM525588 ,
GSM525589 ,
GSM525590 ,
GSM525591 ,
GSM525592 ,
GSM525593 ,
GSM525594 ,
GSM525595 ,
GSM525596 ,
GSM525597 ,
GSM525598 ,
GSM525599 ,
GSM525600 ,
GSM525601 ,
GSM525602 ,
GSM525603 ,
GSM525604 ,
GSM525605 ,
GSM525606 ,
GSM525607 ,
GSM525608 ,
GSM525609 ,
GSM525610 ,
GSM525611 ,
GSM525612 ,
GSM525613 ,
GSM525614 ,
GSM525615 ,
GSM525616 ,
GSM525617 ,
GSM525618 ,
GSM525619 ,
GSM525620 ,
GSM525621 ,
GSM525622 ,
GSM525623 ,
GSM525624 ,
GSM525625 ,
GSM525626 ,
GSM525627 ,
GSM525628 ,
GSM525629 ,
GSM525630 ,
GSM525631 ,
GSM525632 ,
GSM525633 ,
GSM525634 ,
GSM525635 ,
GSM525636 ,
GSM525637 ,
GSM525638 ,
GSM525639 ,
GSM525640 ,
GSM525641 ,
GSM525642 ,
GSM525643 ,
GSM525644 ,
GSM525645 ,
GSM525646 ,
GSM525647 ,
GSM525648 ,
GSM525649 ,
GSM525650 ,
GSM525651 ,
GSM525652 ,
GSM525653 ,
GSM525654 ,
GSM525655 ,
GSM525656 ,
GSM525657 ,
GSM525658 ,
GSM525659 ,
GSM525660 ,
GSM525661 ,
GSM525662 ,
GSM525663 ,
GSM525664 ,
GSM525665 ,
GSM525666 ,
GSM525667 ,
GSM525668 ,
GSM525669 ,
GSM525670 ,
GSM525671 ,
GSM525672 ,
GSM525673 ,
GSM525674 ,
GSM525675 ,
GSM525676 ,
GSM525677 ,
GSM525678 ,
GSM525679 ,
GSM525680 ,
GSM525681 ,
GSM525682 ,
GSM525683 ,
GSM525684 ,
GSM525685 ,
GSM525686 ,
GSM525687 ,
GSM525688 ,
GSM525689 ,
GSM525690 ,
GSM525691 ,
GSM525692 ,
GSM525693 ,
GSM525694 ,
GSM525695 ,
GSM525696 ,
GSM525697 ,
GSM525698 ,
GSM525699 ,
GSM525700 ,
GSM525701 ,
GSM525702 ,
GSM525703 ,
GSM525704 ,
GSM525705 ,
GSM525706 ,
GSM525707 ,
GSM525708 ,
GSM525709 ,
GSM525710 ,
GSM525711 ,
GSM525712 ,
GSM525713 ,
GSM525714 ,
GSM525715 ,
GSM525716 ,
GSM525717 ,
GSM525718 ,
GSM525719 ,
GSM525720 ,
GSM525721 ,
GSM525722 ,
GSM525723 ,
GSM525724 ,
GSM525725 ,
GSM525726 ,
GSM525727 ,
GSM525728 ,
GSM525729 ,
GSM525730 ,
GSM525731 ,
GSM525732 ,
GSM525733 ,
GSM525734 ,
GSM525735 ,
GSM525736 ,
GSM525737 ,
GSM525738 ,
GSM525739 ,
GSM525740 ,
GSM525741 ,
GSM525742 ,
GSM525743 ,
GSM525744 ,
GSM525745 ,
GSM525746 ,
GSM525747 ,
GSM525748 ,
GSM525749 ,
GSM525750 ,
GSM525751 ,
GSM525752 ,
GSM525753 ,
GSM525754 ,
GSM525755 ,
GSM525756 ,
GSM525757 ,
GSM525758 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here
Series (113)
GSE7603
Human TALL tumor vs Normal Human DNA
GSE7615
Cancer Process Study
GSE7822
A comparison of DNA copy number profiling platforms using a panel of melanoma cell lines
GSE9015
Genome-Wide Mapping of Hypomethylated Sites in Human Genomes
GSE9177
Human GBM tumor vs Normal Human DNA
GSE9200
Feedback Circuit among INK4 Tumor Suppressors Constrains Human Glioblastoma Development
GSE11101
Experiment to determine DNA copy number of the HCE-T cell line relative to normal duploid cell
GSE11411
U2OS array-CGH
GSE11416
Comparison of osteosarcoma cell lines and normal human osteoblasts
GSE11938
Chromosomal aberration of ESCC and HSCC cell lines
GSE12088
DNA packaging of human spermatozoal chromatin
GSE12650
Genome-wide mapping cis-regulatory sequence elements in the human genome using Nuclease-Hypersensitive-CGH technique
GSE12668
Waldenstrom's Macroglobulinemia patients: expression and aCGH data
GSE12830
Osteosarcoma Copy Number Analysis
GSE12885
Genome-wide changes in DNA methylation and copy number play a role in deregulation of gene expression in osteosarcoma
GSE13238
DNA packaging of human and murine spermatozoal chromatin
GSE14959
PTEN and the PI3K/AKT Pathway in T-Cell Acute Lymphoblastic Leukemia
GSE15130
PIK3CB aCGH Patient Results
GSE15131
PIK3CB aCGH Cell Line Results
GSE15134
PI3K inhibition in ER+ breast cancer microarray data
GSE15172
Copy number variation analysis of nasopharyngeal carcinoma cell lines
GSE15191
Nasopharyngeal carcinoma cell lines TW01 and HONE1: transcriptomic and genomic analyses
GSE16400
The pitfalls of platform comparison: DNA copy number array technologies assessed
GSE17165
Deregulated expression of cytokine receptor gene, CRLF2, is involved in lymphoid transformation in BCP-ALL
GSE17381
Tumor sample array-CGH profiles
GSE17403
Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis
GSE18408
Genomic Copy-Number Variations in Hepatoblastoma Patients Revealed by Array Comparative Genomic Hybridization
GSE19714
Chromosomal aberrations of human bladder cancer cell lines
GSE19852
aCGH of Pancreatic Ductal Adenocarcinoma (PDAC) Cell Line and Xenografts
GSE19932
Recurrent 17q23.2 microdeletion flanked by segmental duplications associated with heart defects and limb abnormalities
GSE20239
Differential cytogenomics and miRNA signature of the Acute Myeloid Leukemia Kasumi-1 cell line CD34+38- compartment
GSE20564
Genotyping data from one patient with unexplained mental retardation and a deletion in 15q13
GSE21032
Integrative genomic profiling of human prostate cancer
GSE21035
Agilent 244K aCGH data for human primary and metastatic prostate cancer samples
GSE21420
Comprehensive Mapping of Paediatric High Grade Glioma
GSE21530
PAIS experiment
GSE21536
A genotype-first approach for the molecular and clinical characterization of uncommon de novo microdeletion of 20q13.33
GSE21660
Advancing a Clinically Relevant Perspective of the Clonal Nature of Cancer
GSE22547
aCGH hybridization of breast cancer cell line T47D
GSE22905
CGH analysis of triple synchronous mantle cell lymphoma, clear cell renal cell carcinoma and gastrointestinal stromal tumor
GSE23005
High-resolution, genome-wide analysis of human medulloblastoma samples by array-Comparative Genomic Hybridization (aCGH)
GSE23631
RCC cell lines and paired tumors
GSE23633
Array comparative genomic hybridization data from RCC cell lines to study metastasis progression
GSE23823
Array CGH of breast cancer cells with distinct metastatic properties
GSE24216
Amplification and overexpression of vinculin are associated with increased tumor cell proliferation and progression in advanced prostate cancer
GSE24282
CGH microarray analysis of human prostate adenocarcinoma and normal samples
GSE24284
Deep sequencing analysis of transcription-induced chimeras in human prostate adenocarcinoma and reference samples
GSE24328
Molecular characterization of a series of 22 NF1-associated plexiform neurofibromas
GSE24602
Comprehensive array CGH of normal karyotype Myelodysplastic syndrome reveals hidden recurrent and individual genomic copy number aberrations with prognostic relevance
GSE25273
Array Comparative Genomic Hybridization of Pancreatic Xenografts and Cell Lines
GSE25893
A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants
GSE26089
Expression Profiling and Array Comparative Genomic Hybridization of Pancreatic Xenografts and Cell Lines
GSE27229
Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR (Agilent 244K)
GSE27367
Prospective comparison of genome-wide aCGH platforms for the detection of CNVs in MR
GSE27965
CNVs in spermatogenic failure
GSE28114
A comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants (244A)
GSE28329
Genome-wide array comparative genomic hybridization (aCGH) profiling of endothelial progenitor cells, and their comparison to tumor plasma cells, in multiple myeloma
GSE28331
Genome-wide profiling of endothelial progenitor cells in multiple myeloma: disease-relevant pathways and genomic markers
GSE28952
Primary Central Nervous System Lymphomas. A validation study of array-based Comparative Genomic Hybridization in Formalin-Fixed Paraffin-Embedded Tumor Specimens
GSE28989
Identification and functional analysis of 9p24 amplified genes in human breast cancer
GSE29023
Predict cytogenetic abnormalities with gene expression profiles
GSE31451
Cereblon expression is required for the anti-myeloma activity of lenalidomide and pomalidomide [aCGH]
GSE31452
Cereblon expression is required for the anti-myeloma activity of lenalidomide and pomalidomide
GSE32291
Regional complexity in breast tumors reveals patterns of prognostic value
GSE32567
Deletion of UTX, a histone demethylase interacting with MLL2, in three patients with Kabuki syndrome.
GSE32897
Chromosomal aberrations in ETV6/RUNX1 positive cases using high-resolution 244K oligo-based array-CGH
GSE33053
Modeling lethal prostate cancer variant with small cell carcinoma features [genomic profile]
GSE33054
Modeling lethal prostate cancer variant with small cell carcinoma features
GSE33757
Genomic imbalances in BCL1/JH t(11;14)(q13;q32) positive multiple myeloma
GSE34063
Clonal Analysis for Identification of Molecular Pathways with Potential Therapeutic Implications in of Rare Gastrointestinal and Endocrine Cancers
GSE34174
Whole Genome Methylation Analysis of Metastatic Castration Resistant Prostate Cancer
GSE34200
The NIH Human Pluripotent Stem Cell Database
GSE34236
The HER2 amplicon includes several genes required for the growth and survival of HER2 positive breast cancer cells
GSE34816
Clinically significant copy number alterations and complex rearrangements of MYB and NFIB in adenoid cystic carcinoma of the head and neck
GSE35278
Genomic analysis of marginal zone and lymphoplasmacytic lymphomas identified common and disease-specific abnormalities
GSE35735
The NIH Human Pluripotent Stem Cell Database (Agilent, cgh)
GSE36282
Low- and High-Grade Mucoepidermoid Carcinomas have different genomic profiles and CRTC1-MAML2 Fusion Gene Status
GSE36822
Clonal competition with alternating dominance in multiple myeloma [244kCGH]
GSE36825
Clonal competition with alternating dominance in multiple myeloma
GSE38815
Glioblastoma Xenograft Comparative Genomic Hybridization Arrays
GSE39242
Glioblastoma Orthotopic Xenograft Transcriptome and Glioblastoma Xenograft Comparative Genomic Hybridization Arrays
GSE42577
Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (CGH)
GSE42670
Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ
GSE44745
Identification of copy number variations by array comparative genomic hybridization in multi-ethnic multiple myeloma patients
GSE47506
Recurrent 11q aberrations in MYC-neg mature aggressive B-cell lymphomas resembling BL
GSE47508
A recurrent 11q aberration pattern characterizes a subset of MYC-negative mature aggressive B-cell lymphomas resembling Burkitt lymphoma
GSE52352
Cell cycle and P53 gate the direct conversion of human fibroblasts to dopaminergic neurons
GSE54328
STAG2 is a clinically relevant tumor suppressor in pancreatic ductal adenocarcinoma
GSE55150
Desmoplastic Melanoma
GSE55535
Adult AML with complex karyotype
GSE57302
Frozen tumour samples of 131 gastric cancer patients [array CGH]
GSE57308
Array CGH and expression data from gastric cancer patients
GSE63306
Recurrent aneuploidy patterns enable fitness gains in tumor metabolism
GSE64110
Patterns of somatic uniparental disomy identify novel tumor suppressor genes in colorectal cancer
GSE64114
Patterns of somatic uniparental disomy identify novel tumor suppressor genes in colorectal cancer
GSE65484
aCGH profiling for Frozen tumour samples of 50 Hepatocellular Carcinoma patients and 14 Adjacent normal samples
GSE65486
aCGH and RNA-Seq expression profiling of Chinese hepatocellular carcinoma patients
GSE66839
The protein phosphatase 2A regulatory subunit PR70 is a gonosomal melanoma tumor suppressor gene
GSE72194
Combined clinical and genomic signatures for the prognosis of early stage non-small cell lung cancer based on gene copy number alterations [Agilent]
GSE72195
Combined clinical and genomic signatures for the prognosis of early stage non-small cell lung cancer based on gene copy number alterations
GSE74948
Copy number variations distinguish lung adenocarcinomas from squamous cell carcinomas
GSE90928
caArray_socci-00214: TCGA Analysis of Copy Number for OV Using Agilent Human Genome CGH Microarray Kit 244K
GSE92647
Molecular characterization of a series of 7 NF1-associated human MPNSTs
GSE108203
Tumor evolution in the context of castration resistance in prostate cancer
GSE130484
Copy number variations of Ph+ ALL, Ph+ MPAL and Ph+ AML
GSE142573
Copy number alteration profiling of myxofibrosarcoma and undifferentiated pleomorphic sarcoma
GSE153228
Integrated copy number and transcriptomic profiling reveal novel oncogenic drivers and clinically significant biomarkers in adenoid cystic carcinoma [Agilent]
GSE153230
Integrated copy number and transcriptomic profiling reveal novel oncogenic drivers and clinically significant biomarkers in adenoid cystic carcinoma
GSE153314
SMAD4 haploinsufficiency in small intestinal neuroendocrine tumors
GSE181995
Application of Array CGH technique for the clinical diagnosis of developmental delay and congenital malformations in Saudi Arabia [244k]
GSE182101
Application of Array CGH technique for the clinical diagnosis of developmental delay and congenital malformations in Saudi Arabia
GSE184701
Validation of dedifferentiated liposarcoma (DDLS) cell lines with the original tumors via copy number alteration analysis [array]
GSE184702
Validation of dedifferentiated liposarcoma (DDLS) cell lines with the original tumors via copy number alteration analysis
Relations
Alternative to
GPL9128
Data table header descriptions
ID
Agilent feature number
COL
Column
ROW
Row
SPOT_ID
Spot identifier
CONTROL_TYPE
Control type
GB_ACC
GenBankAccession
GENE_SYMBOL
Gene Symbol
GENE_NAME
Gene Name
ACCESSION_STRING
Accession String
CHROMOSOMAL_LOCATION
Chromosomal Location
CYTOBAND
Cytoband
DESCRIPTION
Description
GB_RANGE
NCBI Build 35.1 Accession.Version[start..end]
Data table
ID
COL
ROW
SPOT_ID
CONTROL_TYPE
GB_ACC
GENE_SYMBOL
GENE_NAME
ACCESSION_STRING
CHROMOSOMAL_LOCATION
CYTOBAND
DESCRIPTION
GB_RANGE
1
267
912
HsCGHBrightCorner
pos
2
267
910
DarkCorner
pos
3
267
908
DarkCorner
pos
4
267
906
A_16_P20527812
FALSE
chr16:076331867-076331926
hs|q23.1
NC_000016.8[076331867..076331926]
5
267
904
A_16_P01708709
FALSE
NM_138295
PKD1L1
polycystic kidney disease 1 like 1
ref|NM_138295|ref|NM_025031
chr7:047626734-047626793
hs|p12.3
Homo sapiens polycystic kidney disease 1 like 1 (PKD1L1), mRNA.
NC_000007.11[047626734..047626793]
6
267
902
A_16_P36062310
FALSE
NM_005235
ERBB4
v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)
ref|NM_005235
chr2:213225788-213225847
hs|q34
Homo sapiens v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) (ERBB4), mRNA.
NC_000002.9[213225788..213225847]
7
267
900
A_16_P21111448
FALSE
NM_001008409
TTLL9
tubulin tyrosine ligase-like family, member 9
ref|NM_001008409
chr20:029932639-029932698
hs|q11.21
Homo sapiens tubulin tyrosine ligase-like family, member 9 (TTLL9), mRNA.
NC_000020.9[029932639..029932698]
8
267
898
A_16_P03325298
FALSE
NM_032933
C18orf45
chromosome 18 open reading frame 45
ref|NM_032933
chr18:019174920-019174979
hs|q11.2
Homo sapiens chromosome 18 open reading frame 45 (C18orf45), mRNA.
NC_000018.8[019174920..019174979]
9
267
896
A_14_P106403
FALSE
NM_005920
MEF2D
MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D)
ref|NM_005920
chr1:153264534-153264593
hs|q22
Homo sapiens MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D) (MEF2D), mRNA.
NC_000001.8[153264534..153264593]
10
267
894
A_14_P129311
FALSE
chrX:053705063-053705122
hs|p11.22
NC_000023.8[053705063..053705122]
11
267
892
A_16_P16560117
FALSE
chr3:197830673-197830732
hs|q29
NC_000003.9[197830673..197830732]
12
267
890
A_16_P18390323
FALSE
chr8:090877274-090877333
hs|q21.3
NC_000008.9[090877274..090877333]
13
267
888
A_16_P16752813
FALSE
chr4:085811081-085811140
hs|q21.23
NC_000004.9[085811081..085811140]
14
267
886
A_14_P122429
FALSE
NM_153447
NALP5
NACHT, leucine rich repeat and PYD containing 5
ref|NM_153447
chr19:061207075-061207134
hs|q13.43
Homo sapiens NACHT, leucine rich repeat and PYD containing 5 (NALP5), mRNA.
NC_000019.8[061207075..061207134]
15
267
884
A_16_P01164612
FALSE
NM_001044
SLC6A3
solute carrier family 6 (neurotransmitter transporter, dopamine), member 3
ref|NM_001044
chr5:001482655-001482714
hs|p15.33
Homo sapiens solute carrier family 6 (neurotransmitter transporter, dopamine), member 3 (SLC6A3), mRNA.
NC_000005.8[001482655..001482714]
16
267
882
A_16_P00541510
FALSE
NM_020943
KIAA1604
KIAA1604 protein
ref|NM_020943
chr2:180654806-180654865
hs|q31.3
Homo sapiens KIAA1604 protein (KIAA1604), mRNA.
NC_000002.9[180654806..180654865]
17
267
880
A_16_P03187952
FALSE
chr16:080764256-080764315
hs|q23.3
NC_000016.8[080764256..080764315]
18
267
878
A_16_P03803240
FALSE
NM_014893
NLGN4Y
neuroligin 4, Y-linked
ref|NM_014893
chrY:015325617-015325676
hs|q11.221
Homo sapiens neuroligin 4, Y-linked (NLGN4Y), mRNA.
NC_000024.7[015325617..015325676]
19
267
876
A_16_P17174549
FALSE
NM_018046
AGGF1
angiogenic factor with G patch and FHA domains 1
ref|NM_018046
chr5:076371203-076371262
hs|q13.3
Homo sapiens angiogenic factor with G patch and FHA domains 1 (AGGF1), mRNA.
NC_000005.8[076371203..076371262]
20
267
874
A_16_P16167777
FALSE
NM_003615
SLC4A7
solute carrier family 4, sodium bicarbonate cotransporter, member 7
ref|NM_003615
chr3:027444336-027444395
hs|p24.1
Homo sapiens solute carrier family 4, sodium bicarbonate cotransporter, member 7 (SLC4A7), mRNA.
NC_000003.9[027444336..027444395]
Total number of rows: 243504 Table truncated, full table size 45984 Kbytes .
Supplementary data files not provided