|
| Status |
Public on Nov 01, 2009 |
| Title |
Tumor sample AO.21, anaplastic oligodendroglioma |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
Tumor specimen, snap frozen, -80c stored
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: anaplastic oligodendroglioma
|
| Treatment protocol |
Tumor samples snap-frozen and banked at -80c
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNeasy Blood and Tissue Kit (Qiagen), per manufacturer's instructions
|
| Label |
Cy5
|
| Label protocol |
Genomic DNA labeling kit PLUS (Agilent), per manufacturer's instructions
|
| |
|
| Channel 2 |
| Source name |
Pooled normal genomic DNA, male
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: normal tissue
|
| Treatment protocol |
Tumor samples snap-frozen and banked at -80c
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNeasy Blood and Tissue Kit (Qiagen), per manufacturer's instructions
|
| Label |
Cy3
|
| Label protocol |
Genomic DNA labeling kit PLUS (Agilent), per manufacturer's instructions
|
| |
|
| |
| Hybridization protocol |
Microarray hybridization per manufacturer's instructions
|
| Scan protocol |
2um scanner and Feature Extraction 9.5.3.1 (Agilent)
|
| Description |
tumor profile
|
| Data processing |
Agilent Feature Extraction Software
|
| |
|
| Submission date |
Jul 28, 2009 |
| Last update date |
Sep 29, 2009 |
| Contact name |
Cameron Brennan |
| E-mail(s) |
[email protected]
|
| Organization name |
MSKCC
|
| Street address |
1275 York Avenue
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10021 |
| Country |
USA |
| |
|
| Platform ID |
GPL4091 |
| Series (1) |
| GSE17381 |
Tumor sample array-CGH profiles |
|
