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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 31, 2013 |
| Title |
Illumina HiSeq 2500 (Schizosaccharomyces pombe) |
| Technology type |
high-throughput sequencing |
| Distribution |
virtual |
| Organism |
Schizosaccharomyces pombe |
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| Submission date |
May 31, 2013 |
| Last update date |
Mar 25, 2019 |
| Contact name |
GEO |
| Country |
USA |
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| Samples (1675)
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GSM1152562, GSM1152563, GSM1152564, GSM1152565, GSM1152566, GSM1152567
GSM1152568, GSM1152569, GSM1303994, GSM1303995, GSM1303996, GSM1303997, GSM1303998, GSM1303999, GSM1304000, GSM1304001, GSM1304002, GSM1304003, GSM1304004, GSM1304005, GSM1304006, GSM1304007, GSM1304008, GSM1304009, GSM1304010, GSM1304011, GSM1304012, GSM1467475, GSM1467482, GSM1467483, GSM1467484, GSM1467485, GSM1467486, GSM1467487, GSM1467488, GSM1467495, GSM1467496, GSM1511331, GSM1511332, GSM1511333, GSM1511334, GSM1545340, GSM1545341, GSM1545342, GSM1545343, GSM1545344, GSM1545345, GSM1545346, GSM1545347, GSM1545348, GSM1545349, GSM1545350, GSM1545351, GSM1545352, GSM1545353, GSM1545354, GSM1545355, GSM1545356, GSM1545357, GSM1545358, GSM1545359, GSM1545360, GSM1545361, GSM1545362, GSM1568177, GSM1568178, GSM1568179, GSM1568180, GSM1568181, GSM1568182, GSM1568183, GSM1568184, GSM1568185, GSM1568186, GSM1568187, GSM1568188, GSM1568189, GSM1568190, GSM1568191, GSM1568192, GSM1568193, GSM1568194, GSM1568195, GSM1568196, GSM1568197, GSM1568198, GSM1568199, GSM1568200, GSM1568201, GSM1568202, GSM1568203, GSM1568204, GSM1568205, GSM1568206, GSM1568207, GSM1568208, GSM1568209, GSM1568210, GSM1568211, GSM1568212, GSM1568213, GSM1568214, GSM1568215, GSM1568216, GSM1568217, GSM1590295, GSM1590296, GSM1590297, GSM1590298, GSM1590299, GSM1600430, GSM1600431, GSM1600432, GSM1600433, GSM1600434, GSM1600435, GSM1600436, GSM1600437, GSM1600438, GSM1600439, GSM1600440, GSM1600441, GSM1600442, GSM1600443, GSM1600444, GSM1600445, GSM1600446, GSM1600447, GSM1600448, GSM1600449, GSM1600450, GSM1600451, GSM1600452, GSM1600453, GSM1620818, GSM1638843, GSM1638844, GSM1638846, GSM1638847, GSM1638848, GSM1638849, GSM1638850, GSM1638851, GSM1638852, GSM1861634, GSM1861635, GSM1861636, GSM1861637, GSM1863032, GSM1863033, GSM1863040, GSM1863041, GSM1863044, GSM1863045, GSM1863048, GSM1863049, GSM1863245, GSM1863246, GSM1863247, GSM1863248, GSM1863249, GSM1863250, GSM1863251, GSM1863252, GSM1887735, GSM1887736, GSM1887737, GSM1887738, GSM1887739, GSM1887740, GSM1891664, GSM1891665, GSM1891666, GSM1891667, GSM1891668, GSM1891669, GSM1891670, GSM1891671, GSM1891672, GSM1891673, GSM1891674, GSM1891675, GSM1891676, GSM1891677, GSM1891678, GSM1891679, GSM1891680, GSM1891681, GSM1914783, GSM1914784, GSM1966810, GSM1966811, GSM2104398, GSM2104399, GSM2190460, GSM2190462, GSM2190463, GSM2190465, GSM2208718, GSM2208719, GSM2208720, GSM2208721, GSM2208722, GSM2208723, GSM2208724, GSM2208725, GSM2208726, GSM2208727, GSM2208728, GSM2208729, GSM2208730, GSM2208731, GSM2208732, GSM2208733, GSM2208734, GSM2208735, GSM2208736, GSM2208737, GSM2208738, GSM2208739, GSM2208740, GSM2208741, GSM2208742, GSM2208743, GSM2208744, GSM2208745, GSM2208746, GSM2208747, GSM2208748, GSM2208749, GSM2208750, GSM2208751, GSM2210660, GSM2210661, GSM2210662, GSM2210663, GSM2210664, GSM2210665, GSM2210666, GSM2210667, GSM2210668, GSM2210669, GSM2210670, GSM2210671, GSM2210672, GSM2210673, GSM2210674, GSM2210675, GSM2210676, GSM2210677, GSM2210678, GSM2210679, GSM2210680, GSM2210681, GSM2210682, GSM2210683, GSM2210684, GSM2210685, GSM2210686, GSM2210687, GSM2210688, GSM2210689, GSM2210690, GSM2210691, GSM2210692, GSM2210693, GSM2210694, GSM2210695, GSM2210696, GSM2210697, GSM2210698, GSM2210699, GSM2210700, GSM2210701, GSM2210702, GSM2210703, GSM2210704, GSM2210705, GSM2210706, GSM2210707, GSM2210708, GSM2210709, GSM2210710, GSM2210711, GSM2210712, GSM2210713, GSM2210714, GSM2210715, GSM2210716, GSM2210717, GSM2210718, GSM2210719, GSM2210720, GSM2210721, GSM2210722, GSM2210723, GSM2210724, GSM2210725, GSM2210726, GSM2210727, GSM2210728, GSM2210729, GSM2210730, GSM2210731, GSM2210732, GSM2210733, GSM2210734, GSM2210735, GSM2210736, GSM2210737, GSM2210738, GSM2210739, GSM2210740, GSM2210741, GSM2210742, GSM2210743, GSM2210744, GSM2210745, GSM2210746, GSM2210747, GSM2210748, GSM2210749, GSM2210750, GSM2210751, GSM2210752, GSM2210753, GSM2210754, GSM2210755, GSM2210756, GSM2210757, GSM2210758, GSM2210759, GSM2210760, GSM2210761, GSM2210762, GSM2210763, GSM2210764, GSM2210765, GSM2210766, GSM2210767, GSM2210768, GSM2210769, GSM2210770, GSM2210771, GSM2210772, GSM2210773, GSM2210774, GSM2210775, GSM2258034, GSM2258035, GSM2258036, GSM2258037, GSM2258038, GSM2258039, GSM2258040, GSM2258041, GSM2258042, GSM2258043, GSM2258044, GSM2258045, GSM2258061, GSM2258062, GSM2258063, GSM2258064, GSM2258065, GSM2258066, GSM2258067, GSM2258068, GSM2258069, GSM2258070, GSM2258071, GSM2258072, GSM2258073, GSM2258074, GSM2258075, GSM2258076, GSM2258476, GSM2258477, GSM2258478, GSM2258479, GSM2258480, GSM2258481, GSM2258482, GSM2258483, GSM2258484, GSM2258485, GSM2258486, GSM2258489, GSM2258490, GSM2258491, GSM2258492, GSM2258493, GSM2258494, GSM2258495, GSM2258496, GSM2258497, GSM2258500, GSM2258501, GSM2258502, GSM2258503, GSM2258508, GSM2258509, GSM2258510, GSM2258511, GSM2258512, GSM2258513, GSM2259095, GSM2259096, GSM2259097, GSM2259775, GSM2259776, GSM2259777, GSM2259778, GSM2259779, GSM2259780, GSM2338066, GSM2338067, GSM2338068, GSM2338069, GSM2338070, GSM2338071, GSM2338072, GSM2338073, GSM2359651, GSM2359652, GSM2359653, GSM2359654, GSM2359655, GSM2359656, GSM2359657, GSM2359658, GSM2359659, GSM2359660, GSM2359661, GSM2359662, GSM2359663, GSM2359664, GSM2359665, GSM2359666, GSM2359667, GSM2359668, GSM2359669, GSM2359670, GSM2359671, GSM2359672, GSM2359673, GSM2359674, GSM2359775, GSM2359776, GSM2359777, GSM2359778, GSM2359779, GSM2359780, GSM2393112, GSM2393113, GSM2393114, GSM2393115, GSM2393116, GSM2393117, GSM2393118, GSM2393119, GSM2393120, GSM2393121, GSM2393122, GSM2393123, GSM2393124, GSM2393125, GSM2393126, GSM2393127, GSM2432121, GSM2432122, GSM2432123, GSM2432124, GSM2432125, GSM2432126, GSM2432127, GSM2453303, GSM2453304, GSM2453305, GSM2453306, GSM2453307, GSM2453308, GSM2453309, GSM2453310, GSM2496938, GSM2496939, GSM2496940, GSM2496941, GSM2544920, GSM2544921, GSM2544922, GSM2544923, GSM2544924, GSM2544925, GSM2544926, GSM2544927, GSM2544928, GSM2550632, GSM2550633, GSM2550634...
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| Series (108)
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| GSE47573 |
Structural and functional characterization of the N-terminus of Schizosaccharomyces pombe Cwf10 |
| GSE52170 |
A species-specific nucleosomal signature defines a periodic distribution of amino acids in proteins |
| GSE53955 |
Identification of a novel Bromodomain / Casein Kinase II / TAF-containing complex as a regulator of mitotic condensin function |
| GSE60195 |
yeast U6 3' RACE |
| GSE60197 |
Global 3' RACE in yeast and humans |
| GSE60198 |
The Mpn1 exonuclease defines a novel spliceosomal snRNA decay pathway dependent on Rrp6 and Lsm2-8 complex |
| GSE61688 |
Leo1 is a Global Regulator of Heterochromatin Cis-spreading |
| GSE63304 |
Epigenetic inheritance uncoupled from sequence-specific recruitment |
| GSE64294 |
A high-resolution map of inner kinetochore proteins in fission yeast regional centromeres |
| GSE65223 |
Small RNA loading licenses Argonaute for assembly into a transcriptional silencing complex |
| GSE65579 |
A novel phosphate-starvation response in fission yeast requires the endocytic function of Myosin I (RNA-seq) |
| GSE67105 |
A novel phosphate-starvation response in fission yeast requires the endocytic function of Myosin I (ChIP-seq) |
| GSE67126 |
A new phosphate-starvation response in fission yeast requires the endocytic function of myosin I |
| GSE67410 |
Abo1, a conserved bromodomain AAA-ATPase maintains global nucleosome occupancy and organization |
| GSE72381 |
Landscape of XUT lncRNAs in fission yeast |
| GSE72382 |
Native Elongating Transcript Sequencing reveals global anti-correlation between sense and antisense nascent transcription in fission yeast |
| GSE72479 |
H3K14 and H4 acetylation in wild-type cells of S. pombe |
| GSE72493 |
Native Elongating Transcript Sequencing (NET-Seq) in wild-type fission yeast cells |
| GSE73144 |
Regulation of mRNA Levels by Suicidal Introns that Induce Nuclear Decay |
| GSE73359 |
RNA-SEQ analysis of fission yeast strains mutant for components of SHREC |
| GSE75753 |
The Nrd1-like protein Seb1 coordinates co-transcriptional 3’ end processing and polyadenylation site decision |
| GSE79830 |
Transcriptome and analysis of Wdr70 deletion by next-generation sequencing |
| GSE82326 |
The Nrd1-like protein Seb1 coordinates co-transcriptional 3’ end processing and polyadenylation site selection |
| GSE83538 |
Both H4K20 mono-methylation and H3K56 acetylation mark transcription-dependent histone turnover in fission yeast |
| GSE83600 |
Chromatin remodeler Fun30-Fft3 disassembles nucleosomes to facilitate RNAPII elongation in fission yeast |
| GSE85125 |
Genome-wide analyses reveal widespread roles for Spt5 in sense and antisense transcription [RNA-seq] |
| GSE85127 |
Genome-wide analyses reveal widespread roles for Spt5 in sense and antisense transcription [ChIP-seq_round1] |
| GSE85147 |
RNA surveillance controls 3D genome structure via stable cohesin chromosome interaction |
| GSE85166 |
Ccp1 homodimer mediates chromatin integrity by antagonizing CENP-A loading |
| GSE85181 |
Genome-wide analyses reveal widespread roles for Spt5 in sense and antisense transcription [4tU-seq] |
| GSE85182 |
Genome-wide analyses reveal widespread roles for Spt5 in sense and antisense transcription |
| GSE87672 |
The RNA-induced transcriptional silencing complex is targeted to chromatin exclusively via base-pairing interactions with nascent transcripts |
| GSE89145 |
Survival in quiescence requires the euchromatic deployment of Clr4/SUV39H by Argonaute-associated small RNAs [RNA-Seq] |
| GSE89150 |
Survival in quiescence requires the euchromatic deployment of Clr4/SUV39H by Argonaute-associated small RNAs [siRNA-Seq] |
| GSE89151 |
Survival in quiescence requires the euchromatic deployment of Clr4/SUV39H by Argonaute-associated small RNAs |
| GSE89911 |
Identification of Zfs1 RNA targets |
| GSE93432 |
The histone acetyltransferase Mst2 prevents epigenetic silencing via specific acetylation of the ubiquitin ligase Brl1 [NGS data] |
| GSE93434 |
The histone acetyltransferase Mst2 prevents epigenetic silencing via specific acetylation of the ubiquitin ligase Brl1 |
| GSE95139 |
Comparative Analysis of Alternative Polyadenylation in S. cerevisiae and S. pombe |
| GSE96842 |
Histone H3G34R mutation causes replicative stress, defective homologous recombination and genomic instability in Fission Yeast |
| GSE97057 |
A phospho-mimicking Atf1 mutant bypasses the transcription activating function of the MAP kinase Sty1 |
| GSE97865 |
The 19S proteasome subunit Rpt4 is directly involved in the regulation of heterochromatin spreading |
| GSE97982 |
The histone variant H2A.Z promotes splicing of weak introns (ChIP-Seq) |
| GSE97984 |
The histone variant H2A.Z promotes splicing of weak introns |
| GSE98934 |
Regulated Ire1-dependent mRNA decay requires no-go mRNA degradation to maintain endoplasmic reticulum homeostasis in S. pombe |
| GSE99589 |
The Ino80 complex mediates epigenetic centromere propagation via active removal of histone H3 |
| GSE101086 |
Improved mapping and characterization of R-loop forming loci in fission yeast. |
| GSE101804 |
Nuclear aconitase regulates heterochromatin formation by interacting with Chp1 |
| GSE102905 |
Automethylation-induced conformational switch in Clr4 (Suv39h) maintains epigenetic stability |
| GSE103336 |
The 19S proteasome regulates subtelomere silencing and facultative heterochromatin formation |
| GSE104672 |
Pof8 is a La-related protein and a constitutive component of telomerase in fission yeast |
| GSE104680 |
Short-read nascent RNA sequencing from S. pombe |
| GSE104681 |
Long-read sequencing of nascent RNA in S. pombe reveals coupling among RNA processing events |
| GSE104712 |
Effect of HDAC inhibition on nascent transcription by RNAPII in fission yeast |
| GSE104713 |
Total RNA-Seq in WT and rrp6-delta strains of S. pombe |
| GSE105184 |
Distinct ‘safe zones’ at the nuclear envelope ensure robust replication of heterochromatic chromosome regions |
| GSE106491 |
Centromeric DNA destabilizes H3 nucleosomes to promote CENP-A deposition during the cell cycle (part 1) |
| GSE106492 |
Centromeric DNA destabilizes H3 nucleosomes to promote CENP-A deposition during the cell cycle (part 2) |
| GSE106494 |
Centromeric DNA destabilizes H3 nucleosomes to promote CENP-A deposition during the cell cycle |
| GSE106585 |
Swr1 mediated H2A.ZPht1 incorporation designates centromere DNA for de novo CENP-ACnp1 assembly |
| GSE106649 |
Bases of antisense lncRNA-associated regulation of gene expression in fission yeast |
| GSE106979 |
Histone H3-G34V and H3-G34R mutant fission yeast exhibit distinct chromatin changes and different DNA damage sensitivities. |
| GSE108071 |
Fission yeast telomeres are packaged into a non-canonical histone-containing chromatin structure dependent on Shelterin and RNA. |
| GSE111851 |
RNAi mediates allele-specific epigenetic inheritance of heterochromatin [ChIP-seq] |
| GSE111858 |
RNAi mediates allele-specific epigenetic inheritance of heterochromatin [ncRNA-seq] |
| GSE111859 |
RNAi mediates allele-specific epigenetic inheritance of heterochromatin |
| GSE112454 |
Fission yeasts CENPA and H3K9me Chip-seq |
| GSE114537 |
Polymerase pausing induced by sequence-specific RNA binding protein drives heterochromatin assembly (PAR-CLIP) |
| GSE114540 |
Polymerase pausing induced by sequence-specific RNA binding protein drives heterochromatin assembly |
| GSE115595 |
Common mechanism of transcription termination at coding and noncoding RNA genes in fission yeast |
| GSE115636 |
Schizosaccharomyces pombe Pol II Transcription Elongation Factor ELL Functions as Part of a Rudimentary Super Elongation Complex |
| GSE119745 |
Physical basis for long-distance communication along meiotic chromosomes (ChIP-seq) |
| GSE119921 |
Physical basis for long-distance communication along meiotic chromosomes |
| GSE120352 |
Trans-generational inheritance of a phenotypically neutral epimutation enables descendants to reinstate an ancestral silencing episode |
| GSE123614 |
A genome-wide analysis of carbon catabolite repression in Schizosaccharomyces pombe [ChIP-seq] |
| GSE123617 |
A genome-wide analysis of carbon catabolite repression in Schizosaccharomyces pombe [RNA-seq] |
| GSE123633 |
A genome-wide analysis of carbon catabolite repression in Schizosaccharomyces pombe |
| GSE125335 |
Genome-wide map of DNA replication origin in Schizosaccharomyces pombe |
| GSE125935 |
Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance. |
| GSE129599 |
Cellular quiescence is dependent upon the HIRA histone chaperone |
| GSE136305 |
Hap2-Ino80 mediated transcription facilitates de novo establishment of CENP-A chromatin |
| GSE140920 |
An RNA Endonuclease-Kinase Complex Required for Spreading and Epigenetic Inheritance of Heterochromatin |
| GSE141715 |
Adaptation to industrial stressors through genomic and transcriptional plasticity in a bioethanol producing fission yeast isolate [RNA-seq] |
| GSE141744 |
Adaptation to industrial stressors through genomic and transcriptional plasticity in a bioethanol producing fission yeast isolate [ChIP-seq] |
| GSE144083 |
Adaptation to industrial stressors through genomic and transcriptional plasticity in a bioethanol producing fission yeast isolate |
| GSE145683 |
Transcription-wide distribution of dihydrouridine (D) into mRNAs reveals its requirement for meiotic chromosome segregation. [RNA-Seq] |
| GSE145685 |
Transcription-wide distribution of dihydrouridine (D) into mRNAs reveals its requirement for meiotic chromosome segregation. [Rho-Seq] |
| GSE145686 |
Transcription-wide distribution of dihydrouridine (D) into mRNAs reveals its requirement for meiotic chromosome segregation. |
| GSE150800 |
Chromosomal Mcm2-7 distribution and the genome replication program in species from yeast to humans |
| GSE152083 |
Evolution of the histone variant H2A.W reconstituted in fission yeast [ChIP-seq] |
| GSE152085 |
Evolution of the histone variant H2A.W reconstituted in fission yeast [RNA-seq] |
| GSE152086 |
Evolution of the histone variant H2A.W reconstituted in fission yeast |
| GSE155256 |
Specific translation during aging mediated by phosphorylation of Schizosaccharomyces pombe eIF2alpha |
| GSE159192 |
Mechanism for the selective sequestration of a histone H3K9 methyltransferase at heterochromatin by the H3K9M mutation |
| GSE169231 |
Expression of the cancer-associated DNA polymerase epsilon P286R in fission yeast leads to translesion polymerase dependent hypermutation and defective DNA replication |
| GSE169537 |
A composite DNA element that functions as a maintainer required for epigenetic inheritance of heterochromatin |
| GSE173837 |
RNA-seq and small RNA-seq in fission yeast CPF mutants that enable small-RNA-mediated epigenetic gene silencing |
| GSE181824 |
Transcription-wide distribution of dihydrouridine (D) into mRNAs reveals its requirement for meiotic chromosome segregation [Ribo/RNA-seq] |
| GSE182250 |
Cdk1-dependent phosphorylation of Clr4Suv39H controls a histone H3 methylation switch that is essential for gametogenesis |
| GSE190759 |
Mutational analysis of Rap1 reveals specific vulnerability for long telomeres fusions |
| GSE193552 |
Chromatin remodeling by antisense Pol II primes efficient Pol III transcription |
| GSE212629 |
Differential expression analysis of mutated genes at different loci of H2B |
| GSE212930 |
The conserved RNA-binding protein Seb1 promotes cotranscriptional ribosomal RNA processing by controlling RNA polymerase I progression |
| GSE237860 |
The LARP1 homolog Slr1p controls the stability and expression of proto-5’TOP mRNAs in fission yeast [RNA-seq] |
| GSE243034 |
Ageing-associated long non-coding RNA extends lifespan and reduces translation in non-dividing cells [aal1OE_RNAseq] |
| GSE243036 |
Ageing-associated long non-coding RNA extends lifespan and reduces translation in non-dividing cells |
| GSE250093 |
Nitrogen signaling factor changes gene expression and binding of transcription factors [RNA-seq] |
| GSE250095 |
Nitrogen signaling factor changes gene expression and binding of transcription factors |
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| Supplementary data files not provided |
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