GEO help: Mouse over screen elements for information.
Status
Public on Oct 01, 2002
Title
Atlas Rat 1.2 Array (Cat. #7854-1)
Technology type
spotted DNA/cDNA
Distribution
commercial
Organism
Rattus norvegicus Manufacturer
BD Biosciences Clontech
Manufacture protocol
see manufacturer's web site
Description
Nylon, broad-coverage rodent cDNA array. The cDNA fragments (200-600 bp) are PCR-amplified using gene-specific primers, and are selected so that they lack repetitive elements and have minimal homology with other genes on the array.
Web link
http://www.clontech.com/atlas/index.shtml Submission date
Apr 24, 2002
Last update date
Apr 09, 2008
Organization
BD Biosciences Clontech
E-mail(s)
[email protected] Phone
877-232-8995
URL
http://www.clontech.com Street address
1020 East Meadow Circle
City
Palo Alto
State/province
CA
ZIP/Postal code
94303-4230
Country
USA
Samples (184)
GSM10045 , GSM10046 , GSM10047 , GSM10048 , GSM10049 , GSM10050
GSM10051 ,
GSM10052 ,
GSM10053 ,
GSM10054 ,
GSM10055 ,
GSM10056 ,
GSM10057 ,
GSM10058 ,
GSM10059 ,
GSM10060 ,
GSM10061 ,
GSM10062 ,
GSM13100 ,
GSM13101 ,
GSM13102 ,
GSM13103 ,
GSM13104 ,
GSM13105 ,
GSM13106 ,
GSM13107 ,
GSM13108 ,
GSM13109 ,
GSM13110 ,
GSM13111 ,
GSM13112 ,
GSM13113 ,
GSM13114 ,
GSM13115 ,
GSM13116 ,
GSM13117 ,
GSM13118 ,
GSM13119 ,
GSM14492 ,
GSM14493 ,
GSM14494 ,
GSM14495 ,
GSM14496 ,
GSM14497 ,
GSM14518 ,
GSM17357 ,
GSM17358 ,
GSM17359 ,
GSM17360 ,
GSM17361 ,
GSM34950 ,
GSM34951 ,
GSM34952 ,
GSM34953 ,
GSM34954 ,
GSM34955 ,
GSM34956 ,
GSM34962 ,
GSM34963 ,
GSM34964 ,
GSM34965 ,
GSM34966 ,
GSM34967 ,
GSM34971 ,
GSM34972 ,
GSM34973 ,
GSM34974 ,
GSM34975 ,
GSM34976 ,
GSM34983 ,
GSM34984 ,
GSM34985 ,
GSM34986 ,
GSM34987 ,
GSM62946 ,
GSM62947 ,
GSM62948 ,
GSM62949 ,
GSM62950 ,
GSM63225 ,
GSM112331 ,
GSM112332 ,
GSM112333 ,
GSM112335 ,
GSM112336 ,
GSM112337 ,
GSM112338 ,
GSM112339 ,
GSM112340 ,
GSM112341 ,
GSM112342 ,
GSM112361 ,
GSM112376 ,
GSM112377 ,
GSM112378 ,
GSM112379 ,
GSM112380 ,
GSM112381 ,
GSM112382 ,
GSM112383 ,
GSM112384 ,
GSM112385 ,
GSM112386 ,
GSM112387 ,
GSM112388 ,
GSM112389 ,
GSM112390 ,
GSM112391 ,
GSM189311 ,
GSM189313 ,
GSM189342 ,
GSM189343 ,
GSM189344 ,
GSM189374 ,
GSM189375 ,
GSM189376 ,
GSM189377 ,
GSM189378 ,
GSM189379 ,
GSM194069 ,
GSM194070 ,
GSM194098 ,
GSM211861 ,
GSM211864 ,
GSM211866 ,
GSM211867 ,
GSM319503 ,
GSM319632 ,
GSM319633 ,
GSM319634 ,
GSM319635 ,
GSM319636 ,
GSM319637 ,
GSM319638 ,
GSM319639 ,
GSM319640 ,
GSM319641 ,
GSM319642 ,
GSM319643 ,
GSM319644 ,
GSM319645 ,
GSM319646 ,
GSM319647 ,
GSM319648 ,
GSM319649 ,
GSM319650 ,
GSM319651 ,
GSM319652 ,
GSM319653 ,
GSM319654 ,
GSM319655 ,
GSM319656 ,
GSM319657 ,
GSM319658 ,
GSM319659 ,
GSM319660 ,
GSM319661 ,
GSM319662 ,
GSM319849 ,
GSM319850 ,
GSM319851 ,
GSM319852 ,
GSM319853 ,
GSM319854 ,
GSM319855 ,
GSM319856 ,
GSM319857 ,
GSM319858 ,
GSM319859 ,
GSM319860 ,
GSM319861 ,
GSM319862 ,
GSM319863 ,
GSM319864 ,
GSM319865 ,
GSM319866 ,
GSM319867 ,
GSM319868 ,
GSM319869 ,
GSM319870 ,
GSM319871 ,
GSM319872 ,
GSM3332249 ,
GSM3332250 Series (22)
GSE673 Muscle unloading and reloading
GSE843 Longitudinal analysis of developing neointimal vascular proliferation and pulmonary hypertension in rats
GSE922 CPB vs sham-operated controls (1.2)
GSE924 Cardiopulmonary bypass (CPB) vs sham-operated controls
GSE930 Conditioned Taste Aversion experiment
GSE1084 HS-R5
GSE1957 MI: 1 and 7 days post-op
GSE2890 Rats hypothalamus during heat acclimation without and together with superimposed hypohydration
GSE4492 Transcriptional reprogramming during reloading of atrophied rat soleus muscle
GSE4977 ALCAR supplementation to unloaded soleus muscle
GSE7799 Cardiac and Soleus muscles following exposure of rats to heat acclimation and exercise training
GSE8538 Mesenteric adipose tissue of rats treated with oleoyl-estrone
GSE12743 pCMV-FAK vs pCMV in CTL
GSE12744 pCMV-FRNK/pCMV-FAK vs pCMV-FAK in CTL
GSE12745 pCMV-FAK vs pCMV in HU
GSE12746 pCMV-FAK vs pCMV in R1
GSE12747 pCMV-FAK vs pCMV in R5
GSE16466 Transcriptome analysis of rat soleus muscle after altered loading state and somatic overexpression of FAK
GSE118544 Chronic hypoxia changes gene expression profile of primary rat carotid body cells: consequences on the expression of NOS isoforms and ET-1 receptors
Data table header descriptions ID unique reference number used by BD Biosciences Clontech to identify each gene in collection
GENE_NAME set of names commonly used for the gene, based on the current literature
COORDINATE array coordinate
GB_LIST GenBank accession number
SP LIST SwissProt accession number
GENE Entrez GENE ID
DESC description
CLASSIFICATION set of functional classifications for the gene
Data table ID GENE_NAME COORDINATE GB_LIST SP LIST GENE DESC CLASSIFICATION R234
glypican 1; HSPG M12; nervous system cell-surface heparan sulfate proteoglycan
A01a
L34067 P35053 58920 glypican 1
FR05 SB00 SF00
R077
CD1 antigen
A01b
D26439 Q63493 25109 CD1D antigen
FA00 SB00
R246
leukocyte common antigen (LCA); CD45 antigen; T200; PTPRC
A01c
M10072 P04157 leukocyte common antigen (L-CA)
FV02 FE00 FA00 SB00
R024
integrin-associated protein form 4
A01d
AF017437 O35294 integrin-associated protein form 4
FD02 FD01 SB00
RG068
kidney band 3 anion exchange protein; solute carrier family 4 member 1 (SLC4A1); AE1
A01e
J04793 P23562 24779 Solute carrier family 4, member 1, anion exchange protein 1 (kidney band 3)
FI05 SB00
RG076
myelin protein zero (myelin P0; MPZ)
A01f
K03242 P06907 24564 Myelin protein zero (Charcot-Marie-Tooth neuropathy 1B)
FD00 SB00
RG146
annexin V (ANX5); lipocortin 5; placental anticoagulant protein I (PAP-I); endonexin II; calphobindin I (CBP-I); PP4; thromboplastin inhibitor; vascular anticoagulant alpha (VAC-alpha); anchorin CII
A01g
M21730 , J03898 , J03899 P14668 25673 Annexin V
FT08 FT10 SF00 SC00 SB00
RG396
CD9, surface glycoprotein, platelet
A01h
X76489 P40241 CD9, surface glycoprotein, platelet
FA00 FD02 SB00
RG481
integral membrane protein E16 (TA1); L-type amino acid transporter 1
A01i
U00995 Q63016 50719 tumor-associated protein 1
FI04 FL07 SB00
R464
neuroglycan C; membrane-spanning chondroitin sulfate proteoglycan
A01j
U33553 Q62831 50568 chondroitin sulfate proteoglycan 5 (neuroglycan C)
FD01 FD02 SB00
R215
amphotropic murine retrovirus receptor
A01k
L19931 Q63488 29502 solute carrier family 20, member 2
FR05 FK04 SB00
R438
integrin beta 1 (ITGB1); fibronectin receptor beta subunit (FNRB)
A01l
U12309 P49134 24511 Integrin, beta 1
FR00 SB00
R496
integrin beta 4 (ITGB4)
A01m
U60096 Q64632 25724 Integrin, beta 4
FR05 FD00 SB00
RG007
platelet glycoprotein IV (GPIV); GPIIIB; CD36 antigen; fatty acid translocase (FAT); PAS4; adipocyte membrane protein
A01n
AF072411 Q07969 29184 CD36 antigen (collagen type I receptor, thrombospondin receptor)
FD00 FL00 SB00
RG299
syndecan 3
A02a
U52825 P33671 , P97614 syndecan 3
FD00 SB00
R331
CD44 antigen; phagocytic glycoprotein I (PGP1); HUTCH-I; extracellular matrix receptor III (ECMR-III); GP90 lymphocyte homing/adhesion receptor; hermes antigen; hyaluronate receptor; LY-24
A02b
M61875 P26051 , Q99021 25406 Cell surface glycoprotein CD44 (hyaluronate binding protein)
FA00 FD01 FD02 FR05 SB00 SF00
R221
E-selectin; endothelial leukocyte adhesion molecule 1 (ELAM-1); leukocyte-endothelial cell adhesion molecule 2 (LECAM2); CD62E
A02c
L25527 P98105 E-selectin precursor; endothelial leukocyte adhesion molecule 1 (ELAM-1); leukocyte-endothelial cell adhesion molecule 2 (LECAM2); CD62E
FD02 SB00
R218
P-selectin (SELP); granule membrane protein 140 (GMP140); PADGEM; CD62P antigen; leukocyte-endothelial cell adhesion molecule 3 (LECAM3)
A02d
L23088 P98106 25651 Selectin, platelet
FD02 SB00
R038
L-selectin; lymph node homing receptor; leukocyte adhesion molecule-1 (LAM-1); LY-22; lymphocyte surface MEL-14 antigen; leukocyte-endothelial cell adhesion molecule 1 (LECAM1); CD62L
A02e
D10831 P30836 29259 selectin, lymphocyte
FD02 SB00
R389
ecto-ATPase; cell-CAM 105 (C-CAM 105); ATP-dependent taurocolate-carrier protein; GP110
A02f
M92848 P16573 81613 carcinoembryonic antigen-related cell adhesion molecule
FD00 SB00
1185 166 Kbytes .Supplementary data files not provided
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