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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001363368.2 → NP_001350297.1 girdin isoform 1
Status: VALIDATED
- Source sequence(s)
-
AL935054, BX284634
- UniProtKB/TrEMBL
-
A0A6I8MX08
- Related
- ENSMUSP00000159356.2, ENSMUST00000239407.2
- Conserved Domains (1) summary
-
- cl25732
Location:477 → 1331
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001363369.2 → NP_001350298.1 girdin isoform 2
Status: VALIDATED
- Source sequence(s)
-
AL935054, BX284634
- Conserved Domains (1) summary
-
- cl25732
Location:477 → 1331
- SMC_N; RecF/RecN/SMC N terminal domain
-
NM_001433417.1 → NP_001420346.1 girdin isoform 4
Status: VALIDATED
- Source sequence(s)
-
AL935054, BX284634
- UniProtKB/Swiss-Prot
- Q5M6X2, Q5M6X4, Q5M6X5, Q5SNZ0, Q5SNZ1, Q8C486, Q8CFU7
-
NM_176841.5 → NP_789811.2 girdin isoform 3
See identical proteins and their annotated locations for NP_789811.2
Status: VALIDATED
- Source sequence(s)
-
AI530462, AK082029, AL935054, BX284634, CD803848, CN458498, CN532842, CO044538
- Consensus CDS
-
CCDS24494.1
- UniProtKB/Swiss-Prot
-
Q5SNZ0
- Related
- ENSMUSP00000048978.7, ENSMUST00000040182.13
- Conserved Domains (6) summary
-
- TIGR04523
Location:493 → 1205
- Mplasa_alph_rch; helix-rich Mycoplasma protein
- pfam05622
Location:18 → 584
- HOOK; HOOK protein
- pfam06156
Location:1061 → 1107
- DUF972; Protein of unknown function (DUF972)
- pfam09455
Location:488 → 638
- Cas_DxTHG; CRISPR-associated (Cas) DxTHG family
- cl09111
Location:766 → 859
- Prefoldin; Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits ...
- cl19252
Location:825 → 943
- MreC; rod shape-determining protein MreC
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000077.7 Reference GRCm39 C57BL/6J
- Range
-
29323521..29460808
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006514455.5 → XP_006514518.1 girdin isoform X6
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1331
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam05622
Location:18 → 586
- HOOK; HOOK protein
-
XM_036156225.1 → XP_036012118.1 girdin isoform X7
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1331
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd22229
Location:10 → 165
- HkD_Girdin; Hook domain found in Girdin and similar proteins
-
XM_030245467.2 → XP_030101327.1 girdin isoform X8
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1331
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam05622
Location:18 → 586
- HOOK; HOOK protein
-
XM_036156226.1 → XP_036012119.1 girdin isoform X9
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1308
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd22229
Location:10 → 165
- HkD_Girdin; Hook domain found in Girdin and similar proteins
-
XM_017314219.3 → XP_017169708.1 girdin isoform X10
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1308
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam05622
Location:18 → 586
- HOOK; HOOK protein
-
XM_006514452.5 → XP_006514515.1 girdin isoform X3
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1331
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam05622
Location:18 → 586
- HOOK; HOOK protein
-
XM_036156223.1 → XP_036012116.1 girdin isoform X1
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1331
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd22229
Location:10 → 165
- HkD_Girdin; Hook domain found in Girdin and similar proteins
-
XM_006514451.5 → XP_006514514.1 girdin isoform X2
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1331
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam05622
Location:18 → 586
- HOOK; HOOK protein
-
XM_036156224.1 → XP_036012117.1 girdin isoform X4
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1331
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- cd22229
Location:10 → 165
- HkD_Girdin; Hook domain found in Girdin and similar proteins
-
XM_006514454.5 → XP_006514517.1 girdin isoform X5
- Conserved Domains (2) summary
-
- COG1196
Location:477 → 1331
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam05622
Location:18 → 586
- HOOK; HOOK protein
-
XM_036156227.1 → XP_036012120.1 girdin isoform X11
- Conserved Domains (3) summary
-
- COG1196
Location:491 → 1232
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- pfam15921
Location:182 → 676
- CCDC158; Coiled-coil domain-containing protein 158
- cd22229
Location:10 → 165
- HkD_Girdin; Hook domain found in Girdin and similar proteins