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    CG6686 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34608, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG6686provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032388
    Locus tag
    Dmel_CG6686
    See related
    AllianceGenome:FB:FBgn0032388
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6686; SART1
    Summary
    Predicted to enable RNA binding activity. Involved in positive regulation of gene expression. Part of precatalytic spliceosome. Is expressed in spermatozoon. Orthologous to human SART1 (spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See CG6686 in Genome Data Viewer
    Location:
    33B5-33B5; 2-45 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (11984327..11988039, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (11984327..11988039, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA::CR43314 Neighboring gene uncharacterized protein Neighboring gene bereft Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene zucchini Neighboring gene dim gamma-tubulin 2 Neighboring gene escl

    Genomic regions, transcripts, and products

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding  
    Component Evidence Code Pubs
    part_of U4/U6 x U5 tri-snRNP complex  
    part_of U4/U6 x U5 tri-snRNP complex  
    part_of precatalytic spliceosome PubMed 

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG6686-PA
    CG6686-PB
    CG6686-PC
    NP_723700.1
    • unusual splice

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      11984327..11988039 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135685.4 → NP_609529.2  uncharacterized protein Dmel_CG6686, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609529.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VKD8
      Related
      FBpp0088538
      Conserved Domains (1) summary
      pfam03343
      Location:273 → 912
      SART-1; SART-1 family
    2. NM_164978.3 → NP_723701.1  uncharacterized protein Dmel_CG6686, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723701.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E1JHG4
    3. NM_164977.3 → NP_723700.1  uncharacterized protein Dmel_CG6686, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723700.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95TU2
      Related
      FBpp0088537
      Conserved Domains (1) summary
      pfam03343
      Location:279 → 918
      SART-1; SART-1 family
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