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Items: 15

1.

Major concepts of piRNA biogenesis revealed by the analysis of Shutdown, a co-chaperone with essential roles in the biogenesis of all Drosophila piRNA populations

(Submitter supplied) In animal gonads, 23-30nt long PIWI interacting RNAs (piRNAs) guarantee genome integrity by guiding the sequence specific silencing of selfish genetic elements such as transposons. Two major branches of piRNA biogenesis, namely primary processing and ping-pong amplification, feed into the PIWI clade of Argonaute proteins. Despite our conceptual understanding of piRNA biogenesis, major gaps exist in the mechanistic understanding of the underlying molecular processes as well as in the knowledge of the involved players. more...
Organism:
Drosophila melanogaster
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL13304
13 Samples
Download data: CSV
Series
Accession:
GSE38728
ID:
200038728

PubMed Full text in PMC Similar studies SRA Run Selector

2.

Illumina HiSeq 2000 (Drosophila melanogaster)

Organism:
Drosophila melanogaster
910 Series
18316 Samples
Download data
Platform
Accession:
GPL13304
ID:
100013304

3.

small RNAs (18-29nt) from shu[1]/shu[Def] mutants

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948753
ID:
300948753

SRA Run Selector

4.

small RNAs (18-29nt) from shu[1]/CyO hets and shu[Def]/CyO hets. mixed

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948752
ID:
300948752

SRA Run Selector

5.

small RNAs from FLAG_HA_Aub Immunoprecipitation

Organism:
Drosophila melanogaster
Source name:
Ovarian Somatic Cells (OSCs)
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948751
ID:
300948751

SRA Run Selector

6.

small RNAs from FLAG_HA_Piwi Immunoprecipitation

Organism:
Drosophila melanogaster
Source name:
Ovarian Somatic Cells (OSCs)
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948750
ID:
300948750

SRA Run Selector

7.

small RNAs (18-29nt) from UAS-Dcr-2;NGT;nanosGAL4>shu RNAi

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948749
ID:
300948749

SRA Run Selector

8.

small RNAs (18-29nt) from MTD>vret shRNA

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948748
ID:
300948748

SRA Run Selector

9.

small RNAs (18-29nt) from MTD>aub shRNA

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948747
ID:
300948747

SRA Run Selector

10.

small RNAs (18-29nt) from MTD>vas shRNA

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948746
ID:
300948746

SRA Run Selector

11.

small RNAs (18-29nt) from MTD>piwi shRNA

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948745
ID:
300948745

SRA Run Selector

12.

small RNAs (18-29nt) from MTD>zuc shRNA

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948744
ID:
300948744

SRA Run Selector

13.

small RNAs (18-29nt) from MTD>armi shRNA

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948743
ID:
300948743

SRA Run Selector

14.

small RNAs (18-29nt) from MTD>GFP shRNA

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948742
ID:
300948742

SRA Run Selector

15.

small RNAs (18-29nt) from MTD>w-

Organism:
Drosophila melanogaster
Source name:
Ovary
Platform:
GPL13304
Series:
GSE38728
Download data
Sample
Accession:
GSM948741
ID:
300948741

SRA Run Selector

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