NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss116272638           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000004333_NCBI36.1_chr6_2899556
RefSNP(rs#)rs2295767
Submitted Batch IDILLUMINA_WTSI:NA18507_c6
Submitted DateJan 17, 2009
Publication Cited18987734
First entry to dbSNPJan 17 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss116272638|allelePos=251|len=501|taxid=9606|alleles='C/T'|mol=Genomic
 GTGTCACTGC ATTCCAGCCT AGGTGACAGA GGGAGACCTT GTCTCAAAAA AAAAAAAAAA
 AAAAGTTTAA ATTAAGAACC ACAGATAGAC CAGGGCGTGA CCCAGTGTCC CACAGCAATG
 CATGGCAACT GTAGACTGTG CTACCCAAGA GGGAGGCAGC TTGAGATCCA CACTGCGAAT
 TTTTTATGTT ACTTGTGAAA GGAAAAACTA TATTAACATT AACACACTAA CCCCCTCCTC
 AAAATTAAAA
 Y
 GTGGATTGAT CCAGAAGAGG TATACCAAAC ACTGAAAGGC ATCACGGGTA CACCAAGGAA
 ACAGGGAGAA ATCAGAGAGA ACAGAACACA TTGAGCATTT CCAAAATGTC AAATAATGGC
 AACTGATTTC AGAAGCAGAT TTTTTAAGTT TGCAGTTATT CAGAGAAAAA AAAATCATTC
 CTGTTTACAA TTGACAGTCT TGTGAAGGAA CTGACAATAA AATGGATTAA GAGGTTATTA
 CAAAAGTAGA

  Submitted Frequency for ss116272638 back to top
There is no frequency submission for ss116272638.


  dbSNP summary of Genotypes for ss116272638 back to top
No sufficient data to compute Hardy-weinberg probability for ss116272638.


  Submitted individual genotype for ss116272638 back to top
There is no individual genotype data for ss116272638.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement